Pseudomonas sp. PAMC 26793, D109_RS0114075 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039310, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTGCTGCAGGCGCTGTTGGCCGAACAGGTGCCGGTGCGGGATATTCGCAGCATTGCCGAAGCTATCGCCAACAATGCCGCCAAGAGTCAAGATACTG CCGCCTTGGTGGCCGCAGTGCGCGTCGGATTGTCGCGTGCAATCGTCCAAAGCATTGTAGGGCTTGACTCTGAGCTGCCTGTGATCACCTTGGAACCAAG GTTGGAACAAATATTGCTCAATAGTATTCAGAAGGCTGGGCAGGGCGCTGATGAAGGCGTGTTGCTGGAGCCAAGCATGGCTGAGAAGCTGCAGCGTTCG TTGATTGAGGCCGCGCAGCGCCAGGAAATGGAAGGCCATCCGGTGATCCTGCTGGTGGCTGGCCCCGTCCGGGCGATGTTGTCGCGGTTTGGACGCCTGG CTATACCGAATTTGCATGTATTGGCTTACCAGGAAATTCCTGACAATAAGCAAGTGACTATCGTCGCGACAGTAGGGCCCAACGGCTGAGGTAGTGGGAT
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| DNA Sequence for Gene |
>D109_RS0114075
|flhF
ATGCAAGTGAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTACGTGATGAGTTGGGCGCCGACGCTGCGATTATCGGTAACCGTCGTA TTGCCGGCGGTGTGGAGCTGACGGCTGCCCTGGATTACAAGCCCTCGGCCCTGGCGCCGCGTGTGCCGAACATGGAACTGGAAGACGAGCTGCGCAAGAC CGCTTCGCGCATTGTCTCGGCCCAGGCTGAACTGAGCATGCGTGGCGACAGTGACGCTTCCACCAATCGCCAGTTGTTTGCCGGGTTGCCGCTGACGGCG TCCGAGCCTCTGGTAGAGCCGACTTTTGTTGAGCCGCCGCGTCCTGCTGCGCCCGCCCCGGCGGCAGCGGTAGACCAGCGGGTGTTCGACTCGATGCGTT TCGAACTCAACGGCCTGCGTGAACTGCTGGAAGTGCAGTTGGGCTCCCTGGCCTGGAACCAGTTGCAGGGCAGCCAGCCACAACAGGCCAACCTGTGGCG TCGCCTGCAACGCATCGGCCTGTCCGGCCCGTTGTCCCGCGACCTGCTGCAACTGACCACCCAAATTGAAGAACCTCGCCAGGCCTGGCGCATGCTCCTG GCCCACTTGGCGCGGATGATCGTCACCCCGGAAATCGAACCCCTGGAAGAAGGCGGTGTGATTGCCATGGTCGGCCCTGCCGGCATGGGCAAGACCACCA CCCTGGCCAAGCTGGCCGCACGTTATGTGCTCAAGTACGGCGCGCAGAACATCGCGCTGGTGAGCATGGACAGCTACCGCATTGGCGCCCAGGAGCAACT CAAGACCCTGGGCCGCATCCTCAATGTGCCGGTGACCCACGTCGACCCGGGCCAGTCCCTGGCCAACGCCCTCGACCCGCTGCTGCGCAAGCGCGTGGTG CTGATCGACACCGCCGGCCTGCAAGCCAGTGACCCGGCTCTGCGCATGCAGCTGGAAAGCCTGGCCGGGCGCGGGATCAAATCCAGAAACTATTTGGTAC TTGCCACTACCAGCCAGAAGCAGGTATTGACGGCCGCCTACCACAGCTACAAGCGCTGTGGGCTGGCGGGCTGCATCCTGACTAAACTGGATGAAACGGC AAGCCTGGGCGAAGTGTTGAGCCTGGCCATCAGTCATGAGTTACCGGTTGCCTACCTGACCGACGGGCCGCGGATCCCGGATGATTTGCATCTGCCGCGC CGTCATCAGTTGGTCAGCCGGGCTGTCAGCGTGCAAATGCAGGAAGAACCGAGTGAGGAAGCGATGGCTGACATGTTTGCTGACCTCTACCACAGCCCGA ACAAGCGAGTCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCAATATGAACACATTGCAAAGTATCTACATCGATGGCCTGCCAGCAGTTCCCGCGGCCAACTTATGTAGCCTGCGTCTAAGCAAGACAAGGTAAAGAA ATAAAATGGGCAGCATGCATCCCGTACAGGTGATCGCGGTGACCGGCGGCAAAGGTGGCGTCGGGAAAACTAACGTGTCAGTGAATTTGTCCCTGGCTCT GGCAGAGCTTGGCCGTCGCGTCATGCTGCTGGATGCTGACCTGGGCCTGGCGAACGTCGACGTTCTGCTGGGACTGACGCCCAAACATACCCTGGCCGAT GTGATCGAAGGCCGCTGTGAGCTGCGCGACGTACTGTTGCAAGGCCCCGGCGGGATTCGCATCGTGCCGGCCGCTTCCGGCACCCAGAGCATGGTGCACC TGAGCCCGGCGCAGCATGCCGGCCTGATTCAGGCGTTCAGCGACATCGGCGACAACCTCGACGTGCTGGTGATCGACACCGCCGCCGGGATCGGCGAATC
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYKPSALAPRVPNMELEDELRKTASRIVSAQAELSMRGDSDASTNRQLFAGLPLTA SEPLVEPTFVEPPRPAAPAPAAAVDQRVFDSMRFELNGLRELLEVQLGSLAWNQLQGSQPQQANLWRRLQRIGLSGPLSRDLLQLTTQIEEPRQAWRMLL AHLARMIVTPEIEPLEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNIALVSMDSYRIGAQEQLKTLGRILNVPVTHVDPGQSLANALDPLLRKRVV LIDTAGLQASDPALRMQLESLAGRGIKSRNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTDGPRIPDDLHLPR RHQLVSRAVSVQMQEEPSEEAMADMFADLYHSPNKRVG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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