Pseudomonas sp. PAMC 26793, D109_RS0113985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PAMC 26793 ctg7180000039309, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGACGGCGCCGTTACCCGTGCACCGTGGAGCGCTGACGAATTGGCGCGCTTCACTCGCCTGGTGCAGGACGCAGTGGGCTTTGATGCCAGCCGGGGCGAC AGCGTCAGCGTGATCAACATGCCGTTTTCCGCCGAGCGGGGCGAGGTGATTGCCGAGGCCGCGTTCTATACTCAGCCGTGGTTCTGGGACATCGTCAAGC AAGTGCTGGGTGTGCTGTTCATCCTGGTGCTGGTGTTCGGCGTGCTGCGTCCGGTGCTTAACAACATCACCGGTCACGGCAAAAAACAACTGGCCCTGGC CGGTGGCGACGTCGAGTTGGGTGGCATGGGCGGCCTCGATGGCGAACTGGCCAACGACCGCGTGAGCCTCGGTGGCCCGCAAAGCATTCTGTTGCCGAGC CCGAGCGAGGGTTATGACGCTCAGTTGAACGCAATCAAGAGCCTGGTGGCCGAAGACCCGGGTCGTGTGGCCCAGGTCGTGAAAGAGTGGATTAACGCAG
DNA Sequence for Gene
>D109_RS0113985
ATGAGTGATAGCCGAGCTGCAGTAGCCAAACTCTCCCGGGTCGACAAAGCCGCCGTGCTGTTGCTGTCCCTTGGAGAAACCGACGCCGCCCAAGTGCTGC GCCACATGGGCCCCAAAGAGGTTCAGCGTGTCGGCGTGGCCATGGCGCAAATGCGCAATGTGCACCGCGAGCAAGTCGAGCAGGTGATGAGCGAGTTCGT CGAGATCGTCGGCGACCAGACCAGCCTGGGCGTCGGCTCCGACAGCTACATTCGCAAGATGCTCACCTCGGCCCTGGGCGAAGACAAGGCCAACGGCCTG ATCGACCGCATCCTGCTGGGTGGCAATACCAGTGGCCTCGACAGCCTGAAGTGGATGGAACCGCGGGCCGTGGCCGACGTGATCCGCTACGAACACCCGC AGATCCAGGCGATCGTGGTGGCGTATCTCGACCCCGACCAGGCCGGCGAAGTGCTTGGCCATTTCGACCACAAGGTGCGCCTGGACATCATCCTGCGCGT CTCGTCGTTGAACACCGTGCAGCCAGCGGCCCTGAAAGAATTGAACACCATTCTCGAGAAGCAGTTCTCGGGCAATTCCAACGCTTCGCGTACCACGTTG GGCGGCATCAAGCGTGCGGCCGACATCATGAACTTCCTCGACAGCTCGGTGGAAGGCCAGTTGATGGACTCGATCCGCGAGATCGACGATACCCTGTCGG TGCAGATCGAAGACCTCATGTTCGTATTCAACAACCTCTCCGATGTCGACGACCGTGGCATTCAGGCGTTGCTGCGTGAAGTCTCCTCCGACGTGCTGGT ACTGGCCCTCAAGGGCTCGGACGAAGGCGTCAAGGAAAAGATCTTCAAGAACATGTCCAAGCGGGCTTCCGAACTGTTGCGCGACGACCTCGAGGCCAAG GGCCCGGTGCGCGTCAGCGACGTGGAAACTGCGCAGAAGGAAATCCTCACCATTGCCCGCCGTATGGCCGAAGCCGGAGAAATCGTTCTCGGTGGGAAGG GCGGCGAAGAAATGATTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGCCGCGCATGTCGAACAAAGATGAGACGCCCAGCGATCTGATTCGCGCACGGGACGTCGGAGGGTTCGACGTCTGGTCGTTGCCCAGTTTCGACCCG CATCGCCCGGAGCCTGAACCCGAGCCGGTAGAAGAAACCCCGGCCGAGATGGAAGAAGTGCCGCTGGAAGAAGTCCAGCCGCTGACCCTGGAAGAGCTCG AAAGCATTCGTCAGGAAGCCTACAACGAAGGGTTTTCCACCGGCGAGAAAGACGGTTTTCGCAGCACCACCCTCAAGGTTCGCCAGGAAGCCGAGGCGGC GCTGAGCGTCAAGCTCTCCAGCCTGGAAACCCTGATGGGCAGCCTGTTCGAGCCTATCGCCGAGCAGGATTCGCAGATCGAAAAAGCCATGGTCGGGCTG GTGGAGCACATCACCCGCCAGGTGATTCAGCGCGAATTGGCCCTGGATTCCACGCAAATCGAAAGCGTGATGCGCGAAGCCCTCAAGCTGCTGCCCCTGG
Amino Acid Sequence
>flagellar motor switch protein FliG
MSDSRAAVAKLSRVDKAAVLLLSLGETDAAQVLRHMGPKEVQRVGVAMAQMRNVHREQVEQVMSEFVEIVGDQTSLGVGSDSYIRKMLTSALGEDKANGL IDRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLGHFDHKVRLDIILRVSSLNTVQPAALKELNTILEKQFSGNSNASRTTL GGIKRAADIMNFLDSSVEGQLMDSIREIDDTLSVQIEDLMFVFNNLSDVDDRGIQALLREVSSDVLVLALKGSDEGVKEKIFKNMSKRASELLRDDLEAK GPVRVSDVETAQKEILTIARRMAEAGEIVLGGKGGEEMI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site