Pseudomonas sp. PAMC 26793, D109_RS0109685
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039298, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTCATCCGCATCACCCGCATGCGCGCCTAGCCCATCCATTACAAGGAGTCATTCATGACCAAGACTGTTATCACCAGCGACAAGGCACCAGCAGCAAT CGGTACTTACTCCCAGGCGATCAAGGCGGGCAATACCGTCTACATGTCCGGCCAGATTCCACTGGACCCAAAAACCATGGAGCTGGTTGAAGGCTTTGAA GCCCAGACCGTACAGGTCTTCGAAAACCTGAAGTCGGTTGCCGAAGCTGCGGGCGGTTCGTTCAAGGACATCGTCAAACTGAACATCTTCCTCACCGACC TGAGCCACTTCGCCAAGGTTAACGAGATCATGGGCAAGTACTTCGAACAGCCGTACCCGGCCCGCGCCGCCATCGGCGTTGCCGCCCTGCCAAAGGGCGC GCAGGTTGAGATGGACGCCATTCTGGTCATCGAGTAAAACATCCGGCGCAGCGCTTCCACGGGAAGGCTGCGCCGAATTGGTTCTTGGAAGGATTTCGTA
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| DNA Sequence for Gene |
>D109_RS0109685
ATGCGCAAAGCGCTCGTTGCCTCTTCGTTGCTCGCCCTGCTGCTCGGCGGGTGCGCCAGCAATCCCGCCGACCTGGATGTGAGCGGCACCTGGATCAACC AGGCCGCCATCGACGCGGCAGCCAAGGGCGGCCCTTTGCGTGAAGCCCTGCAGAGCTACGGTCCGAACCTCGAATGGGAGGTGAACACCAAAGCATCCCA GGCCCGCTACTACAACGGTTTTGAAGTAGCTGAAGGCAAGTTGCTGGGTGAAAAATCCGGCGCCTGGAGCGTCGATTTCTACGGCGGCTCCGCCACCGAA CTCAAGCGTAAAGGCAAACTATTGCTGCAAGGGGCCAATGATAACGAGCCCGAGCAACTGTTCGCCCGTGCCAAGGACCCAGCCCCCGAAGGCGCGCCGC TGGGTGCCAACTTCGAACGCACGCTGTACGCCGCTTATATGGGTGGCACCTGGAAGATCAGCAGCGGCAATGGCGAAGGCGCAACCGTGCAGTTCCAGGC CAACGGCCAGGTGACCGGCCTGCCGGGCGCTGATCAGTATTCGCTGTGCCTCGCGGGCGATTGCGCCTCCATGAGCGGTGGCTACGACAGTATCTGGCTG CAGCTGAACGGCCAGGGCAACCCCTGGATCTTCGCGCGCAAGGGCAAGCAACTGGAGATCTTCCAGGCGATCAACACCGCCCAGGCCGACGAGGTGCCCT CGTTTACCCCCGGGCCGCGACAATGGTTGCTGGAAAAACAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACAGAACAAAGGAGCCCACGGGCTCCTTTTTCTTTAGTGTGCGCCATGGTTTTTTTCATCTGCCGCCAGATCACCCCATGCATAAATTACTTGTTCTCA GCCTGTTCCTGCTGGGCGGCTGTACCCAAGCGCCGCAGCCAACCGACATCAGCGGACTGTGGATAAACCAGGCAGCCATCGATTCGGCTGCCCAAGGCAG GCCCTTGCTGCGAGCCATTGATGCGCATGGCTTAAATCTGGAATGGAACATCGACACCCGCAGCAACAAGGCGCAAGTCAGCAATGCATTTGAACTGGGC GAAGGCCAATTACAGCCGAAGGCGCCGGGTGCATGGACCGTCGACTACAACGGCCATGGCACCGATGAACTGCAATTGGATGGCAACCAACTGATCCAGC AGGCCACAAAAAATCATGCAGCCCAGCGCTTCACCCGTCCCGTCCAACCTGCCGTTGCGCACGCCCAGTGGGGCATGACGTTCAGACGTGCACTGAACTC
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| Amino Acid Sequence |
>hypothetical protein
MRKALVASSLLALLLGGCASNPADLDVSGTWINQAAIDAAAKGGPLREALQSYGPNLEWEVNTKASQARYYNGFEVAEGKLLGEKSGAWSVDFYGGSATE LKRKGKLLLQGANDNEPEQLFARAKDPAPEGAPLGANFERTLYAAYMGGTWKISSGNGEGATVQFQANGQVTGLPGADQYSLCLAGDCASMSGGYDSIWL QLNGQGNPWIFARKGKQLEIFQAINTAQADEVPSFTPGPRQWLLEKQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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