Pseudomonas sp. PAMC 26793, D109_RS0107815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PAMC 26793 ctg7180000039298, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTCCCCACAGTGAGCTTGTTGGCGCGTTATACCGCGACCATCGCAGCTGGCTGTTGGCGTGGCTGCGACGCAATGTGGCCTGCCCCAGCCGTGCCGAAG ACCTGAGCCAGGACACCTTCATGCGCCTGCTCGGCCGTGAAGAACTGCGTGAGCCCCGCGAGCCGCGGGCATTTCTCGTGGCCATTGCCAAGGGCCTGCT GTTCGACTACTTCCGCCGCGCCGCCCTGGAACAGGCTTACCTCACCGAGCTGATGCTGATCCCGGAAAGCGAACACCCGTCTCCTGAAGAGCAGCAACTG ATCCTCGAAGACCTCAAGGCCATCGACCGCCTGCTGGGCAAACTCTCGAGCAAAGCCCGCGCGGCCTTCCTCCATAGCCGCCTCGATGGCATGGGCCACG CCGAAATCGCCCAGCGTCTTGGGGTTTCCGTGCCTCGGGTACGGCAATACCTGGCCCAAGGCATTCGCCAGTGCTACATCGCCCTGTATGGCGAGCCCCT
DNA Sequence for Gene
>D109_RS0107815
GTGAGCCCGATCAGTTCCAAGCCGGTCTCGGCACGGGTGCTTGACGCCGCCATTGCCTGGCAACTGTCCCTCGATTCGGGCGACGGCAACGCCGTGGAAC AGGAAGAGTTCGCCAAATGGCTGGCCAGCAATGAAGAACACGCCCGGGCCTGGCGCCAACTGGGCATGCTCGATCAGCGTTTCAGCGTGGCCTCGGGCCC GGCCCGTGCAGCGTTGCTGCAATCGCGCGAAGGCATTCGCAAGCGCGTGCGCAAGCTCGGCAGCGGCCTGGCCAGTGTGGTGCTGGTGTGCGGTCTGGTG CTCTTCGCCGGCCAGCGCTACGTGCCGCTCAACTATTGGCTGGCCGACCAGCGCACCGCCACCGGCGAACAGCGCACCCTGAAGCTGGCGGACGGTACGG TGATCAACCTCAATACCCACAGCGCCATCGACGTGCGCTTCGACGAGAAACGCCGGCTGATCGTGTTGCAGGAAGGCGAGATCCTCGTCGAGACCGGCCA CAACGACGCCCGCCCGTTTTTTGTCGAAACCCGCGAAGGCAGCCTGCGCGCCTTGGGCACGCGGTTTATCGTCAAGCGCGAAGACGACGGCACGCGCCTC AGCGTGTTGCAGTCTGCCGTCGGCGCACAGCCTGAAGCGCTGCATCAGGAACAGATCTTCAAGGAAGGCCAGCAAGTCCTGATGCGCCGCGACGGCCTCG GCCCGATGCTGGCTGTCAGCCCCGGCACCGACGCCTGGACACGCGGCATGCTGGTGGTCGACAACGCGCGCCTCGGCGACGTGGTTGAGGAACTGAGCCG CTACCGCACCGGCTACCTGGGTGTGGATAAACAGGTGGCCGACCTGCGCATCACCGGCAGCTTCCCGCTGCACGACACCAACCTGGCGCTGAATGCACTG TTGCCGACCTTGCCGGTGCAGATTCAACAACACACGCCGTGGTGGGTGACGGTGGCGCCCAAGCCGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTCCTGTGGTGCATAGGCCGTTGTCATCGCAGGCAAGCCAGCGCCCACAGGTGGGATGCGTTCCCCTGTGGGAGCTGGCTTGCCTGCCATGAGGCCCTC AAAAACAGCACTCACCCACTAATAGAAATTATTTTCATCGAGCCCTATCACTTTTTGCATCTCGCTCGGCACATAGGCAATTGAGAAATATTTCCATTCA GGAGCCGCCGTATGTCCCGCACGCTAGACACCCTATTGCGCCCCAGCCTGTTAGCCGTGGCCATTGCCCTCAGCGCCCCGCTGGCCAGCACCCAGCTGAT CGCCGCCGAACAGGCCTCCAGCGTGCGCGCCTACAACCTGCCGGCAGCGCCGCTGGCCACGACCCTGAACCAGATCGCCAGCCAGGCCGGTTTGGCGTTG ACGCTGAACCCAGGGTTGGCGGCGGGCAAGACTTCCGCGCCGGTGAAAGGGCAATTCGATGCGCAGGGCGCGTTGCGTGAAGCGTTGCGTGGGACCGGGC
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MSPISSKPVSARVLDAAIAWQLSLDSGDGNAVEQEEFAKWLASNEEHARAWRQLGMLDQRFSVASGPARAALLQSREGIRKRVRKLGSGLASVVLVCGLV LFAGQRYVPLNYWLADQRTATGEQRTLKLADGTVINLNTHSAIDVRFDEKRRLIVLQEGEILVETGHNDARPFFVETREGSLRALGTRFIVKREDDGTRL SVLQSAVGAQPEALHQEQIFKEGQQVLMRRDGLGPMLAVSPGTDAWTRGMLVVDNARLGDVVEELSRYRTGYLGVDKQVADLRITGSFPLHDTNLALNAL LPTLPVQIQQHTPWWVTVAPKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site