Pseudomonas sp. PAMC 26793, D109_RS0107090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039296, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGGCGACAGCCTGCGGGCGCTGGTGATCGGCACGGTGGTGTTCTTCACCGCGTTCAACCTGCTGGAGGCTTCATTGCCTTCGCTGATCAGTAAGGTTTC ACCGGCCGGCGGCAAAGGCACGGCGATGGGCGTGTATTCCACCAGCCAGTTCCTCGGTTCTGCACTGGGCGGGATCATGGGCGGCTGGATGTTCCAGCAT GGCGGTTTGTCGGTTGTGTTCCTGGGATGCGCAGGTCTGGCTGCCCTCTGGCTAGCCTTTGCTGTTACCATGCGCGAACCTCCCTATGTGACGAGCCTGC GCTTGCCGTTATCGCCCGAAGCGATCCGCGAAGCCGGTCTGGTCGAGCGCCTTAAGGCCGTTGTTGGGGTTACGGATGCTGTGGTTGTTACTGAAGAAGC CGCCATCTACATCAAATTGGACACCGAATTATTGGATCGCGCGACGCTCGAGCAACTGGTCAACCCAGTGCCGACAGCGCGCCCAGCCTAGGAGAACGTT
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| DNA Sequence for Gene |
>D109_RS0107090
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGTACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCGAACGGTAACGCCGTGACCAACCTGAGTC TGGCGACCAGCGAGCAGTGGACCGACAAGCAAACCGGCCAGAAGGTCGAGAAAACCGAATGGCACCGTGTGTCGATGTTCGGCAAGGTTGCAGAGATCGC CGGTGAATACCTTCGCAAAGGTTCGCAGGTCTACATCGAAGGCAAACTGCAAACCCGCGAGTGGGAAAAAGACGGCATCAAGCGTTACACCACTGAAATC GTGGTCGATATGCAAGGCACCATGCAACTGCTGGGCGGCCGTCCGCAGGGCGACCAACAGGGCCAGGGCGGCATGTCCAACTCGGCACCGCGTCCACAGC AGCAGTCCCGTCCGCAGCCGACCCAGCAGCCACAGCGTGAGTCGCGTCCAGCGCCACAGCAGGCTGCTCCTCAGCCGGCAGCCGACTTCGACAGCTTTGA TGACGATATCCCGTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCGCTTGAGACCCGAACTGTCGCGTAACACCTGAAAACCCCCGATGGCTTTTGCCTCGGGGGTTTTTCATTTCGTGGCTGGCAACCGGCTAAACATCA GCAGAGGCGGCGCTCACCACCAGTTCCCGAAACCGCTCCAGCACTGACGACGTATCACCCACCCGCGTTGCCAAATGCAACGGCGCTACCAGGCTACGAC ACTCCGACAGCTCCCGATAAACAATCCCGTCCCCCCGCAACCGCTGCATGGATGCCGGCACAATCGAAACCCCAAGCCCTGCAGCCACGAGGCTTAACGT CGCCGTCATGCGCGGCGCTTCCTGCACAACCTGCGGGCTGAAACCTGCTTCGCGACACGCCACCAGAATCGCGTCATACAACCCAAGTCCCACCCGGCGG CGATACAGCACAAACGCCTCGGTGGCCAATGCCGCCAACGGCAGCGGTGTCGACGGATCGAGAGCCAGCGGGTGATCAGTGGGCAGTGCCAGCAACATCG
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| Amino Acid Sequence |
>single-stranded DNA-binding protein
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEI VVDMQGTMQLLGGRPQGDQQGQGGMSNSAPRPQQQSRPQPTQQPQRESRPAPQQAAPQPAADFDSFDDDIPF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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