Pseudomonas sp. PAMC 26793, D109_RS0104920
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039290, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCGGCAGGTTCAGGTGCGCCTGCATCCAGCGCTCGCAGGCGGCGTGGGCCAGGTTCAGGTGCAGCCAGAGAAATTCGTCGGGATCACCGGGTTGCTGCA AGGCCGCCAGGGCAGTGGCTGAGTCAATCTGTTCGCCCTTTTCACCGGGGCGAAAACGAAAACCGTAAAGCAAGCCAAACAGGTCGGAGTCCTGGTGGCT GTGGTCGATGCTGTGGTTCATGGAGGCTCGCAGGGAAAGTGCCTGTAGGAGATTTCACAGGTTCACTTGGAGCGCATCATGGCAAGTCTGGTTGACAGTT TTGTGACGGTTTTGAGAGCGGCAGGCAAGTGGTGCAATAGTGGCCTTTTGACAGGCTTTTCACCGCCTGTCCGATAGGCTCAAGAAGCGTCTGGCACGGC CGATTCAAGCGCAAGCAACGCTGTGGATGAGGCGGTCTTTTCAGACAGGGACGTCATGGCGGGCATGCTCCCCTTTTCCCTGTTTCGAGGATTTTCCCCG
|
|
| DNA Sequence for Gene |
>D109_RS0104920
ATGAATCTTTTGCGAAAGTCCTTGAGAGCACAGATCTTGTCGCTGCTCGGTGGCAGCCTGCTGGCGATGCTGTTGATCGCCCTGGCGTGTTTTCATTTTC TTTCCAGTGGCGTGCAGAGTTACCGCAGCTTGCTGGAAGGGCCGTTGCAGACTTCACAATTGATCGATGAAGCGAACCTGCAATTCAAGGTGCAAGTGCA GGAATGGAAGAACGTCTTGTTACGTGGCAAACAACCCCAGGACATGGAGAAGTACTGGGGGCAGTTCCAGGATCGGCAACGGGATGTGCAAGGCATTCTC GGCCACCTGGTGAGCCAGACCCAGAGTGATCAGGCCTTGAGCCGACGCCTTGAGGCTTTGCGTCAGGAGCATCAGGTGTTGGGCGTGGCCTATCAGAAAG GGCGCGATGCCTACCTGGCGGCGGGTGCGGATCCGGCGGCGGGCGACAACGCGGTCAAGGGCGTGGACCGCGCCGTCAGCGAGCAGATGAGTGCATTGGT CAGCGAGTTGCACGCCCAAGGCACGCAGCAATCGTTGCTGATCAGCACCCAGGCCGATCGCACGGTCATGTTGGGGGTGGCGGTGATGTTGCTGTCGGGT GTGTTGATTGGCCTGCTGAGCCTGTGGCTGATCAGTCGCAACCTGATTGCACCGATCCGCGAGCTGATCGAGTACGTCGCGCAACTGAGCCAGGGGCGCT TTGCCAATCGAGTGGCCAGCCAACGTGAAGATGAACTGGGGCGCCTGGCCGCAGCCGCCAATACGTTGCGGGACTTCCTCGCGGAAACCTTCAGCCGTTT GCAGCGCAGTGCCACTGACCTGGTGGGCGCCAGCGGCGAGCTGGGGGCGATTGCCGGGTTGATGGCCAAGGGCACCGCAGAGCAGTTTGACCGCACCGAT CAGGTGGCCACGGCCATGACCGAAATGTCGACCACCGCCCAGGAAGTCGCGCGCCACGCCGCGAGTGCTTCCCGAGCTGCCGATGAAGCCGATCATTCGG CCCGTGAGGGGGGCGAGGTGATGAAGGTGACCATCGCCACTATCGGCCGGATGCGCGACGAGATCCTTAACACCGGCACGATCATTCGGCGCCTGGAAAC CGACAGTGTGCGCATCGGCAAGGTGCTGGAAGTGATCCGTGGCATTGCGGAGCAAACCAACCTGCTGGCCCTCAACGCAGCCATCGAGGCGGCGCGTGCC GGGGAAGCGGGCCGCGGGTTTGCCGTGGTCGCCGACGAAGTGCGCAGCCTGGCGCAGCGCACGGCGGCGTCGATCATCGAGATCAATCAGATTATCGGGG CGGTGCAAACGGGCGCGGTGGATGCGGCGGAGGCTATTGTCAGTGGCCAGGCGTGCAGTGATGAGAGTGTGGAAAAAGTGTCCCAGGCGGGCGCGATGCT GAACCAAATCACCCAGGCGGTGGAAGCCATCCGCGACATGAACCGCCAGATTGCCACGGCGGCGGAGGAGCAAACCTCGGTGGCAGAGGACATCTCGCGA AATATCACGCAAATCACCACCGTCGCCACGACCAATCTGGATAACGTGCAACGTACCGACGCAGCCAGTCAGAACCTGCGCAGTTTGTCGGTGGAGTTGA ACGAGGTGACAGCGCGACTGAGCGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAGGCCGTCGGCAAACTGAAGCTGAACACCGTGCCGTCCTGCTCGCTGGAAGACACTTCCAGCCGCCCGCCATGGGCGTCGGCAATCTGTTTGACGATG TACAAACCCAGCCCCAGGCCGGCCTGGGGCTGGGCGCCCGTCGGTCGGGAGTAGGGCTGGAACAGCAGCGGCATGGCTTGATCACTGATCAGCCCAAGGT TTTTCACGGTTAACTCAAACGTGCCGGCGTTGACCTGCGCATTGACTTCAACCGGCCCTTCGGGACTGCCGTGGCTGATGGCGTTGGCCACCAGGTTGGA GAGCAATTGCGCCAGCCGCTCGCGGTCGCCTTTCACGCCGTTGAGATTGCCGATGCGGGCGTGAATCAGCCGCTTGGGGTGCACGTGCTGCACCTCGTCC ACCACGTGCTGCAAGGTGTCTTCCAGCCCCGGGCACTCGCCGATGTTCACCGGGATGCCGCTGCCCATTCGGCCGCGGGCAAAGTCCAGTACGTCCTCCA
|
|
| Amino Acid Sequence |
>chemotaxis protein
MNLLRKSLRAQILSLLGGSLLAMLLIALACFHFLSSGVQSYRSLLEGPLQTSQLIDEANLQFKVQVQEWKNVLLRGKQPQDMEKYWGQFQDRQRDVQGIL GHLVSQTQSDQALSRRLEALRQEHQVLGVAYQKGRDAYLAAGADPAAGDNAVKGVDRAVSEQMSALVSELHAQGTQQSLLISTQADRTVMLGVAVMLLSG VLIGLLSLWLISRNLIAPIRELIEYVAQLSQGRFANRVASQREDELGRLAAAANTLRDFLAETFSRLQRSATDLVGASGELGAIAGLMAKGTAEQFDRTD QVATAMTEMSTTAQEVARHAASASRAADEADHSAREGGEVMKVTIATIGRMRDEILNTGTIIRRLETDSVRIGKVLEVIRGIAEQTNLLALNAAIEAARA GEAGRGFAVVADEVRSLAQRTAASIIEINQIIGAVQTGAVDAAEAIVSGQACSDESVEKVSQAGAMLNQITQAVEAIRDMNRQIATAAEEQTSVAEDISR NITQITTVATTNLDNVQRTDAASQNLRSLSVELNEVTARLSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|