Pseudomonas sp. PAMC 26793, D109_RS0103305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039290, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACCCCGCCTCTGTGGCTGGATGACCTGCAAGCCGCCGGCATCCCCCATGCGTGGAGCACCGATATCCTCACCCGCCTGTGGCGCAAACTGGCCCTGAAC TGCGCCATCAACCCGCTGACTGTGCTGTATGAATGCCGCAATGGGGAACTGCAAGCCCATCAGTGCGAAGTGGCCACCCTGTGCGCCGAACTCGCCGAAC TGCTGGAATGCTGCGGCCAACCCGCCGCCGCACAGGATTTGCAGAGCGAAGTGGAACGGGTGATCCAGGCCACGGCGGCCAATTACTCATCGATGTACCA GGACGTGGCCAATGCCCGACGCACCGAAATCAGCTACTTGCTGGGCTATGCCTGCCAGGCGGCCGCACGTCACCAACTGACCTTGCCGCACCTGCAACAA CTTCAGGTCCGCCTGGTACAGCAACTGTCTGCACGCGGATTGCCCAGCGACTGAAGCACGCGCTACCCTGCCTGCTTGTTCCTTTGCAGCGAAAACCTTG
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| DNA Sequence for Gene |
>D109_RS0103305
ATGCCACTGCGCCAGCGTCTCGAAAATCTACCGGTTGGGCAAAAACTGCTGGCGGCCCTGCTGGTCTTGTTGACCACCGTCTTGCTGGTGGCCAACCTGA CCTTTATCAGCGCCGCCTACTGGATCTCCCAGGAAAGCATGGCACCCCAGGCCTTGCAGGCCATCGGTCGACTGGTGTCGAACCCGTCGCTGGCTGCCCA GGCCCTGGACTCGCCGCTCAAGGCGCAGAACCTGCTGGATGAACTGACCAGCTATTCACCCTTGCGGGCCGCAGCCTTATATGACGGTGAGGGTACGCGC CTGGCCCAACTGCAACATGCCAATCGCCTGCACCTGCCAGCCAATTACAATGAAATCGAAATCTGGCGCGCCACCGAGTTTCGCAGCAATCAGGTGATCA CCCTTCCCCGTGCCGGCCAACCGTCCGGGCATTTGCTGCTGGTGGCCAGCAGCGAACTGCCGGTGGCTTTTTACACCGGCACCTTTACCGCCAGCCTGGG CATCCTGATTTTCAGTGTGCTGCTGTGGCTGGTGATTGCCCGACAGATCAAGCGCCTGATTACCCGACCGATCCATGAACTGGAAGAACTGTCGCGTCAG GTCACCCGGGAAGAGAACTACGCCTTGCGCGCCGGTCGCGGCAACCACGACGAAATCGGCAGCCTGGCCGAAGCCTTCAACACCATGCTTTCGCGCATTG AAGCCCGCGAGCAACAACTCAAGCGCGCACGGGACGATTCCCAGGCCGCCTACGATCAGGCCCAGGGCCTGGCGGAAGAAACCCGCCACACCAACCGCAA GCTGGAACTGGAAGTCCAGGTGCGCAGCAAGATCGAGAAAAAACTCACCGGCTTCCAGAACTACCTCAACAGCATCATCGACTCGATGCCCTCGGCGCTG ATCGCCCTGGATGAACAGCTCTATGTCACCCAGTGGAACCAGGAAGCCAGCGCGCTTTCCGGCACCCGTCTGGATGAGGCGTTGAACCAACCGATCTTCC TTGCCTTCCAACCGCTCAAACCTTTTCTGCCGCAAATCAAGGCCACGGTGGAGCAACACACCGTGGAGCGGATCGAGCGGGTGACCTGGGTCAAGGATGA CGAGCCCAAGCACTATGCCCTGACCTTCTACCCGCTGATGGGCGGCGCCGGGCGCGGCGTGGTGATCCGGATCGATGACATCACCCAGCGCCTCTCCTTG GAAGAGATGATGGTGCAGTCGGAGAAGATGCTCTCGGTCGGCGGCCTGGCCGCCGGCATGGCCCACGAAATCAACAACCCGCTGGGGGCGATCCTGCATA ACGTGCAGAACATCCGCCGCCGCCTGTCCAACGAACTGCCGAAAAACCTTGAGCATGCCGAACAGGTGGGCATCGACCTGGACATGGTCAACCGCTACCT GCAAAGCCGCGAAGTGCCGCAATTGCTCGACGGCATCCAGCAGGCCGGAGCCCGGGCGGCAAAAATCGTCACCCACATGCTCAGCTTCAGCCGCCGCAGC AACCGCCAGATGGCGCCCTGCGATCTGCCGGCCTTGATCGACCAGGCCGTGGAAATTGCCGGCAACGACTTCGACCTCATCGTCGGTTTCGACTTCAAGG GCCAGGCGATCATCCGCCAGTTCGACCCACAACTGGGCCCCGTCCCCGGCACCGCCAACGAACTGGAGCAGGTACTGCTCAACCTGCTGAAAAACGCCGC ACAGGCGATTCACCAGCGTGAAAATGACAGCGAGCCTGGGCGTATCATCCTGCGTACCCGGCTCAACCCGCCGTGGGCGGAAATCCAGGTGGAAGACAAC GGCATCGGCATGAGCGAGAACGTGCGCAAACGCACGTTTGAACCGTTCTTCACCACCAAGGAAATCGGCCAGGGCACCGGGCTTGGCCTGTCGGTTTCGT ACTTCATCATCACCAACAATCACAAGGGCCAGATGGAAGTCCAATCGACCCTCGGCCAAGGCACCTGTTTCACCCTGCGATTACCTTTGGCGGGCAGCCA ATTGCCCCCCAACGAACTCACTCAACTGGAGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATGGGCTTTCGCCTGTCGAAGATTTACACCCGTACCGGCGACAAGGGCGAAACCGGCCTGGGCGATGGTCGCCGCGTGCCAAAGGACCATCCACGGGT CGAGGCGATTGGCGAAGTCGATGCGCTGAACAGCCAGCTGGGTTTGTTGTTGGCGGGTCTTGAGGAACAGAGCGGGCAGCATCCGGCATTGAAGGATGTG ATCGAGGTGCTGACGCCTTGCCAGCATCGGCTGTTTGATCTGGGCGGCGAGTTGGCGATGCCGGTGTACAAGGCGCTGAATGCGGCGGAAGTCGACCGGC TTGAAGCGGCGATCGATCGCTGGAATGAAGAAGTCGGGCCGCTGGAGAACTTCATTCTGCCGGGTGGTTCGGCGTTGACTGCCCAGGCTCATGTGTGCCG CAGCCTGGCTCGCAGTGCCGAACGGCGGTGTCAGCACCTGAATGCAGTGGAACCGCTGGAAGGCGTCGGGTTGGCGTACATCAACCGGCTGTCGGACCTG
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| Amino Acid Sequence |
>sensor histidine kinase
MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYWISQESMAPQALQAIGRLVSNPSLAAQALDSPLKAQNLLDELTSYSPLRAAALYDGEGTR LAQLQHANRLHLPANYNEIEIWRATEFRSNQVITLPRAGQPSGHLLLVASSELPVAFYTGTFTASLGILIFSVLLWLVIARQIKRLITRPIHELEELSRQ VTREENYALRAGRGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFQPLKPFLPQIKATVEQHTVERIERVTWVKDDEPKHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSNELPKNLEHAEQVGIDLDMVNRYLQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQMAPCDLPALIDQAVEIAGNDFDLIVGFDFKGQAIIRQFDPQLGPVPGTANELEQVLLNLLKNAAQAIHQRENDSEPGRIILRTRLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSTLGQGTCFTLRLPLAGSQLPPNELTQLER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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