Pseudomonas putida S610, EDP1_3904

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1885, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGGTGTAGCCCACCACCATCTGCTGCCCATTACGCTCGGCTGCGCTCTGGGCGTTCTGCTGCACCGGGAACAATTCGGGTTCCTGGCTCCAGTACCAG GCAAGACCGATGCACACCAGTAGGTAGAGCCCGACCAGGGCCAACAGTGAGCGGCCCCACAGGCCACCAAAATAGCTACGGGCGGCAGCGCCGCGGCCGT CGACACGCTCGCGGGGCTCGGCTTTGGCCTCGCGGTTTTTCCAGTCCAGCATGGCTATATCCTTGATCAGTCACGACGGTTCAGGGGCTTTGACCACAGG CCTACGCCAGGGTGCCACGGCAAGCCCGCCTGACAGCACTATAAAGCAGACACTGCCTTACGCATAAGCGACCCCTGGGTCGGTAACTGAATAGCCATTC AGCCCAGTTTGTTGAAAGGGGGCACGCATCGGCAGCTCAAGAGCTGCTAGCATAGAGCCATCACTGCCCCTGCATACCCCTAACGACAAGTAGCCAGGAC
DNA Sequence for Gene
>EDP1_3904
ATGAGCCAAGCAGTTGAGCCGAGCCCGCAGTGCCCCGCTGAGCATGTCGCGCGTAGCGGCCTGCGCAAGGACGATCCACACGATCAGTTGCTGCTGGCGC CCCAGCGCAGGCCGGTCTATATCCTCTTGCAGGACCACGACCGCGCCGAGCGCCTGGCCCAGCAACTGGAATTCTTCGGCCTGGGCGTACAGGCCTTGCC CACTGCCGATGCCTTTCGCGCATCGGTGGGTGAATGCCCGCCTTCAGCGGTCATCATGGACGTCGACTTCAATGGGGTCGGCCAGGGCCTGGCGTTGGCG GCCGAAGTCCAGGCGCGGCAGACCAGACCCCTGCCGCTGCTGTTCTTCAGCCACCACGAAACCGACACCCCGACGCGCTTGGCCGCCGTGCGGGCGGGCG GTCGCGATTTCCTCACCGGGACACTCGAGGCCTCCAGCCTGCTGGAGAAGGTCGAGCTGCTGACCGATGCCGCGCCGTACGATCCCCTGCGCGTGCTGAT CATCGATGACTCACGCACCCAGGCCCTGTTCACGGAACGGGTGTTGGCAGGCGCCGGGATGATCACCCGCAGCCTGACCGACCCGATCGCCACCATGAAC GAGCTGGCTGATTTCCAGCCTGACCTGATCATCCTCGACCTGTACATGCCAGCCTGCACCGGCCCTGAACTGGCCAAGGTGATTCGCCACAACGACCGCT ACGTCAGTGTGCCAATCATTTACCTGTCGGCCGAGGATGACCTGGACAAGCAGCTTGAGGCCATGAGCGAAGGCGGCGATGACTTTCTGACCAAGCCGTT TCGCTCGCGCCACCTGATCACCACCGTGCGCAACCGCGCTGCCCGCGCTCGGCACCTGAAGGCGCGCATGGTCCGCGACAGCCTGACCGGGCTGTACAAC CACACCCATATCCTGCAGTTGCTCGAAGATTGCAGCTTCCGTGCCCGCCGCGAACAGCAGCCGTTGAGCTTTGCCATGCTCGACATCGACCGCTTCAAGA AAATCAACGACCGCCACGGCCACCCCATGGGCGACCGGGTGATCAAGAGCCTGGCGCTGTTTCTCAAGCAGCGCCTGCGCAAGACCGATTTCATCGGCCG CTACGGTGGCGAAGAATTCGCCATCGTCATGCCCAACACCGCATTGGATGCGGCGTACAAGGTGCTTGATGACATCCGCGGGCGTTTTGCCGAAATCCTC TACCCGGCCCAACCCCATGACCTGCGCTGTACGTTCAGCGCGGGCGTGGTGCAACTCGATGACGGGCTCGATGCCCTGACCATGGCCAGCGCGGCCGACG AGGCGCTGTACCGGGCCAAGCATGGGGGACGCAATTGCGTGGTGCGTGTGGAACCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGGCTAGGCAAAGATTAAAGGCACTTTGCCAGTCAACTGCGTGCCGCCGTCATCATCGCGTCACACGAACGCCATAACTTCAGGCCCCTGACTCCTCCC TCCCCCGCAGGAAGCTCGCGGCTATGCGCCTGAAGTGGCTGACCAATTTGAATACGTTGTTGCTGGTGACGGTGTGCATCGCCCTGGGCGTCACGCTGTG GTGGTCGCAGCGGGCGCTGGAGCGCCCCTACCAGATGATGGAGCGCTACCTGACCCTGTCGCGCCAGTTTCAGACCGAGGCGGCCGAGAACATCCAGGCC TATCTTGGCAACGGCGATGCTGTGCGCCATGCCGCGGCACTGCAGGCCACGGTGCAACTGCAAGCCTCGCTGGCCGACTGGCCCGAGGCGCTGGCCAGCC GACTGCGCCCCAGCCTGGACGACCTCCAGGCCTTCAGCGCGGGTGAGCTGCTGGCAGCCGGCAAGCTGGCCGGGGACCCGCAGGCGCTGTTGCTGCAAGC
Amino Acid Sequence
>diguanylate cyclase domain protein
MSQAVEPSPQCPAEHVARSGLRKDDPHDQLLLAPQRRPVYILLQDHDRAERLAQQLEFFGLGVQALPTADAFRASVGECPPSAVIMDVDFNGVGQGLALA AEVQARQTRPLPLLFFSHHETDTPTRLAAVRAGGRDFLTGTLEASSLLEKVELLTDAAPYDPLRVLIIDDSRTQALFTERVLAGAGMITRSLTDPIATMN ELADFQPDLIILDLYMPACTGPELAKVIRHNDRYVSVPIIYLSAEDDLDKQLEAMSEGGDDFLTKPFRSRHLITTVRNRAARARHLKARMVRDSLTGLYN HTHILQLLEDCSFRARREQQPLSFAMLDIDRFKKINDRHGHPMGDRVIKSLALFLKQRLRKTDFIGRYGGEEFAIVMPNTALDAAYKVLDDIRGRFAEIL YPAQPHDLRCTFSAGVVQLDDGLDALTMASAADEALYRAKHGGRNCVVRVEP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site