Pseudomonas putida S610, EDP1_2286

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01409 JCVI: twin-arginine translocation signal domain IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal 9 27 1.1E-4
Pfam PF13379 NMT1-like family - - 38 278 6.5E-45
PANTHER PTHR30024 ALIPHATIC SULFONATES-BINDING PROTEIN-RELATED - - 18 375 1.5E-46
Gene3D G3DSA:3.40.190.10 - - - 40 131 8.8E-19
CDD cd13553 PBP2_NrtA_CpmA_like IPR044527 Nitrate/bicarbonate ABC transporter substrate-binding domain 43 263 2.4617E-88
Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal 9 30 6.8E-6
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 42 275 6.95E-38
Gene3D G3DSA:3.40.190.10 - - - 143 341 8.8E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.