Pseudomonas putida S610, EDP1_3136 (mpl)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S610 EDP1.NODE_1820, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCAGCGACAAAGCGCAGTTGCTGGACTTGCTGCTGCGCCAGGAAACCCAAGGCCAGCTGATCGAGCTCGAGCCCCAGGCACGTGAGGTTCTGCTGGACT ACCCCTGGCCTGGTAACGTGCGGCAGATGCGCAACGTGCTGCGCACCTTGGCAGCCCTGTGCGACGAGGGCCGCGTCACGCTGGCGGACCTGCCTGCCGT GGTGCGCACGGCGCGTCGGCAAGACGCCGCGCCAGTGGCCACGTCAGTCTTGCCGAATGAGGGGTCATCGGTACCTGGGGGCAAGACCGCATTGGAGGCG GCCGAACGCCATGCGCTGCTGGCCGTTCTCGAGGCCCGGCATTGGCAGCTTACCCGGGTAGCCGAGCATCTGGGCATCAGCCGGAATACGCTGTACCGCA AGCTACGCAAGCATGGCATCACTCGCCCTTTGTAACGAAACAGCGGGTGCGATTTGTCGCGCCCTGGGCTACCCTGCCTCGATGTTTTGCGAGGTCGACC
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| DNA Sequence for Gene |
>EDP1_3136
|mpl
ATGCACATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGATCGGACGCCAACG TCTATCCACCGATGAGCACCCAGCTCCAGGCCCAGGGCATCGAGCTGACCCAGGGCTATGACCCTGCCCAGCTGGAGCCGGCTCCCGATCTGGTGGTCAT TGGCAACGCCATGTCCCGTGGCAACCCGGCGGTGGAGCATGTGCTCAACAAGGGCCTGCCTTATGTGTCGGGCCCCCAGTGGCTGGCCGACCACGTGCTG CAGGGCCGCTGGGTGTTGGCCGTCGCCGGCACCCATGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTACTCGAGCATGCCGGCATGAGCCCTGGGT TCCTGATCGGTGGGGTGCCGCAGAATTTCTCCGTCTCGGCGCGGCTGGGTGACACGCCGTTCTTCGTGGTCGAAGCGGACGAGTACGACAGCGCCTTCTT CGACAAGCGCTCGAAGTTCGTGCACTACCATCCGCGTACGGCCATCCTGAACAACCTGGAATTCGATCACGCGGACATTTTCCCTGACCTTGCCGCCATC GAGCGTCAATTCCATCACCTGGTGCGCACCATCCCCAGCGAAGGGCTGGTGATCCATCCCACGTCCGAACACGCGCTGGCGCGGGTCATCGAGATGGGCT GCTGGACGCCCGTGCAGACCACCGGTGACGGCGGTCAGTGGCAGGCACGCCTGCTCAGCCCGGACGGGTCGCGTTTCGAGGTGCTGTTCGAGGGGCACGT GCAAGGCGTGGTGGACTGGGCCCTGACCGGTCAGCACAACGTGGCCAACGCCTTGGCGACCCTGGCAGCCGCTCGTCACGTTGGCGTGGCACCGGCGATG GGCATCGAGGGCCTCAGTGCGTTCAAGAGCGTCAAGCGGCGCATGGAAAAGGTCGCCGAAGTGCAAGGCGTGACCATCTTCGATGATTTTGCCCATCACC CCACGGCTATCGCCACCACCCTGGACGGCCTGCGCAAGCGCGTGGGTGATGCATCGGTGATCGCCGTCATCGAGCCGCGCTCCAATTCGATGAAACTGGG CGCGCACCGCGATGGCCTGCCTGAGAGCGTCAACGATGCCGATCAGGTGATCTGGTATGCCCCGGCCAACCTGGGTTGGGACCTGGCAGCCACGGCCGCG CAATGCAAGATCCCGAGCGTAGTGGCCGACAGCCTCGAGGCGATCATCGAGCAGGTCAAGCGTCAGGCGCGACCCGGTACCCAGGTGGTGATCATGAGCA ACGGCGGCTTTGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTCAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGGCCGCAACGCATTACCCTGGCGATGACCGGTGCGTCGGGTGCGCAGTACGGCCTACGCCTGCTCGATTGCCTGGTGCGCGAAGATCGGGAAGTGCA CTTTCTGATTTCCAAGGCTGCACAGCTGGTCATGGCGACCGAAACCGACGTGCTGCTGCCTGCCAAGCCGCAGGCGATGCAGGCGTTCCTGACCGAGTAC ACCGGGGCTGCCGACGGGCAAATTCGGGTGTATGGCAAGGAAGACTGGATGTCGCCCGTGGCGTCGGGCTCCGGCGCACCGGCGGCCATGGTGGTGGTGC CATGTTCCACCGGCACGCTGTCGGCGATCGCCACGGGTGCGTGCAACAACCTCATCGAGCGGGCTGCCGATGTCACCCTCAAGGAGCGTCGGCAGTTGAT TCTGGTGCCTCGTGAGGCGCCGTTTTCCACCATTCACCTCGAGAACATGCTCAAGCTGTCGCAGATGGGTGCGGTGATGCTACCGGCCTCGCCTGGCTTC
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| Amino Acid Sequence |
>L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
MHIHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLQAQGIELTQGYDPAQLEPAPDLVVIGNAMSRGNPAVEHVLNKGLPYVSGPQWLADHVL QGRWVLAVAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFSVSARLGDTPFFVVEADEYDSAFFDKRSKFVHYHPRTAILNNLEFDHADIFPDLAAI ERQFHHLVRTIPSEGLVIHPTSEHALARVIEMGCWTPVQTTGDGGQWQARLLSPDGSRFEVLFEGHVQGVVDWALTGQHNVANALATLAAARHVGVAPAM GIEGLSAFKSVKRRMEKVAEVQGVTIFDDFAHHPTAIATTLDGLRKRVGDASVIAVIEPRSNSMKLGAHRDGLPESVNDADQVIWYAPANLGWDLAATAA QCKIPSVVADSLEAIIEQVKRQARPGTQVVIMSNGGFGGLHGKLAEALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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