Strain | Pseudomonas putida S610 EDP1.NODE_1815, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGCTCTGGCAGGCGTTGGCCGAGCGGTCAACGGACTGAACAAAGTAACGGCCTGCTGCTGTTCAGCCGGGGTTGCAGTGCGCTTCCCACATCATTGAGC AGCAACAGGCCAGCGCCCTCTTCAAGTCATGGAATACGGATGATTTCGACGCCAGTGCGGGCAAGCTCGAATCGATTTTCACCCAGGTAATTGACGCGGT CGCCGATGGCAAGGCGGTAGGTAGTGATAGGTGCGCCGGTCGTGCTGCCGTCGAGTTGCAGGGTAGATTCCTGGAACTCGTGCACGGGATAGATACGGCC TTCGGCGTCGCGGGCATGGAATTGGCCGACCATTACTGCTGCCATTTGGGTGGAACCCTCTGAATTGCGTAGGAAATGTCTGTAGCAGTAGACCTTCCAA GGGCAGGGGAAGTTTTCGCGGCCGGGAAAAAAAACCAAAGCAGCGCAAAACGGTCATCTATAACTACATCGTCCCTGAAAACGTGAAGTTGGAGATTGCC
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DNA Sequence for Gene |
>EDP1_1696
ATGACCCAGGTCTATTCGGTTGCCGTCGTCGTCGGTAGCCTGCGCAAGGATTCCTATAACCGCAAGGTGGCTCGCGCGCTGTCTGAACTGGCGCCGTCGA GCCTGGCACTGAAGATCGTCGAAATCGGCGACTTACCCCTGTACAACGAAGACCTGGAAACCGATGCCCCGCCAGCTGCCTGGACACGCTTTCGGAACGA CATCAAGGGCAGCGATGCGGTGCTCTTCGTCACCCCGGAGTACAACCGGACAATGCCAGGCTGCCTGAAGAATGCCATCGATGTGGGTTCACGGCCTTAC GGGCAAAGCGCATGGGGCGGCAAGCCGGCAGCCGTGGCGAGTGTGTCGCCCGGTGCGATCGGCGGCTTCGGTGCCAACCATTCGGTGCGCCAGTCCCTGG TGTTCCTGGACATGCCATGCATGCAGATGCCGGAAGCCTACATTGGCGGCGCTGCCAGCCTGTTCGACGAGTCAGGCAAACTCAACGACAAGACCCGGCC ATTTCTGCAAGGCTTTATCGACAAGTTCGCGTCTTGGGTGAAGCTGAATCGGTCTGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGTGGGCTAAGCGGCGACACATTGCGCGGGCCCAGCCGGCCGGCGCAATGTTTGTCAGCCAAGGGCTGCCCGATTGTGGCAGTCAGCGGAATGTATAGG ACACTCCCGCATAGACCGCAGCGCCTTCGCCCGGCGTGGAGCGGGCAATGTCCCGCCCTGCGTCGTTGAAGCCAGGGGTTACGGTCGCTGCGTAGCGCTT GTTGGTCAGGTTGCGTAGATCCAGCCAGGTCTGCCAGTCACGCTGCGGCGAGTCCCAACCCAGGCGAGCACCCAGGGTGGCGTAATCGTCGGCATGGTAG CTGTTGGCATAGTCCACTTGCACCTTGGACGCCATCTCCGTTTTGACCCCGGCGTAGAAGCCATTGGGCCAGTCGAAGCGCAATTCGGCCTGATAGTAGT GCATGGGGATGCCCGGCAGGCGGTTATCGCCGAACTTTTCGTCGTCGCGGTAATGAAAATCACTGAAGGTATAGGCCTGGCGCAGGCTCAAACGCCCCAG
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Amino Acid Sequence |
>NADPH-dependent FMN reductase family protein
MTQVYSVAVVVGSLRKDSYNRKVARALSELAPSSLALKIVEIGDLPLYNEDLETDAPPAAWTRFRNDIKGSDAVLFVTPEYNRTMPGCLKNAIDVGSRPY GQSAWGGKPAAVASVSPGAIGGFGANHSVRQSLVFLDMPCMQMPEAYIGGAASLFDESGKLNDKTRPFLQGFIDKFASWVKLNRSV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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