Pseudomonas putida S610, EDP1_3532 (mqo)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S610 EDP1.NODE_1811, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTATGACCACGGCAAATCTACCCGCCTCGCCCACAGAGAGCCTTCCACTCAGGTCTTGCATCGGCTGTCGTGCCTGCTTCCATGGCCGTCACACTGCAA AGAACCTGCGGGTTGCCATCGCGCAGTCCCCTTTTGAGGTTCACGTCTCCAAAAGAGCGTGAAAAAACGGTTTTCACTACTTCACAAGAGTGTGGCGAGC AAATGAACAATCTGGCATGTGCAAAAGCGGCAGGTGTGTCCCCTACAGCCCTGAACAGGCGGCAAATGGCCCCAACCTGGATGCGTGTCTGAGCGGCTTG CGTAGCGCATCCGACGGTCGTTGACCATAAGTCGAATTGCCGCACCTGGGGCAAACAGGGTTCAATAGGCGAACCCGAAGACTGGTTGGCGGTGTCCGCG GACGTTGCATGAACTGCGAAAAGTCGGACATGGCGATCCTGGAGAACCCGGTGATCCTGTGCTGTCAATTAGGTAGCTGTAGATTGTGGAGACGCGTTAA
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| DNA Sequence for Gene |
>EDP1_3532
|mqo
ATGGCGCAGAACGAATCGGTTGATGTAGTACTGGTAGGCGCAGGCATCATGAGTGCCACCCTGGCCGTACTGCTCAAGGAGCTCGACCCGACCCTGAAAC TCGAAGTGGTCGAGGCGATGGACTCCGGTGCCGCAGAGAGTTCCAACCCCTGGAACAACGCAGGCACCGGCCACGCCGGCTTGTGCGAGCTGAACTACAC GCCCCAGGCCGCTGATGGCAGCATCGACATCAAGAAGGCCGTGCACATCAATACCCAGTTCGAGGTGTCTCGCCAGTTCTGGGCCTACTTGAGCAAGAAA GGCAACTTCGGCCCGGCGCGGGCGTTCATCAACCCGGTACCGCACCTGAGCTACGTCGAGGGTGACAAGGGCATCGCCTTCCTGAAAAAGCGCTATGAAC TGCTCAAGCAGCATCACGCTTTTGCCGAGATGGAGTACACCGACGACAAGGCCGTAATGAACGAGTGGATGCCGCTGATGATGCCGGGGCGCCCGGCTGA CCAGCACATTGCCGCCACCCGGGTGCTCAAGGGAACCGACGTCAATTTCGGGGCCCTGACCAACAAGCTGCTCAAGCTGCTGGGCGATGCGCCCGACGCG CAGGTCAAGTATTGCAAGAAGGTCGTAGGCCTGCGTCGCAACGGCGCCGGCTGGACGGTCAGCATCAAGGACGTCAACAGCGGCGGCAGCCGCGAAGTGG ACGCCCGCTTCGTGTTCCTCGGCGCCGGTGGCGCGGCCCTGCCGCTGTTGCAAGCCTCCGGCATCCCCGAAAGCAAGGGCTTTGGCGGCTTCCCGGTCAG TGGCCAGTGGCTGCGTTGCGACAATCCGGAAATCGTCAGTCAGCATCAGGCCAAGGTCTACAGCCAGGCCGCCGTTGGCGCGCCGCCCATGTCCGTGCCG CACCTGGACACGCGCGTGGTCGACGGCAAGAAATCCCTGCTATTCGGGCCGTACGCCGGCTTTACCACCAAGTTCCTCAAGCACGGTTCGCTGCTGGACC TGCCCCTGTCGGTACGCCTGGGCAACCTTGGCCCGATGCTGGCGGTGGCCCGCGACAACATGGACCTGACCAAGTACCTGGTCAGTGAGGTGATGCAGTC GATGGAGCAGCGCCTGGAATCCCTGCGCCGCTTCTACCCCGAGGCCAAGGCCGAAGACTGGCGCCTGGAAGTGGCTGGCCAGCGTGTCCAGATCATCAAG AAGGACCCGAAAAAAGGCGGCGTTCTGCAGTTCGGTACCGAGTTGGTGTCTGCCCAGGACGGCAGCCTGGCGGCGCTGCTGGGCGCATCGCCCGGTGCTT CGGTGACGGTCTCGATCATGCTGGAACTGATCGAGCGCTGCTTCCCGGAGCAGGCAAAAGGCGCCTGGGCAGCCAAGCTCAAGGAGATCTTCCCGGCGCG CGAGAAGACCCTGGCCACCGACGCTGCGCTCTACCAGAAGATCAGCGCCGACAACGATGCGGCACTGGATCTGGTGCAAAGCAGCCCGGCAGCCAAGCAT TACGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCCCGGCCAATGAAAAACGCCCCTCGGGGCGTTTTTTCATGCCCGTGAGCGGGCGTTTTCGATGATTTCGAGGTATTCCTCACCATTGCGCTGATCG GCGATCTGCTCGGCAAACGTCTTGCCGTGCTCGTCCTTGCCATCGAGGTCCAAGCCTGCTTCGACGAAGAAGCCAACGAAACGCCGGAAGTCATCCACCC GCAAGCCGCGGTATGCCTTTACCAGCTTGTGCAGCGAGGGCGAGGTGACCCCATCGGCGGGCTCGAACTGGAGAAACGCCTTGATGTAATCGTCGCTGAT TTCGTCACCGATTACCTGTTTCTTGTCTTTACGCATTGCCGACTCCAACTGGACCATCACGATGTTCAAAGGGCGGCAGTGTACCTTCCGCCACGCGCGA GCCTCAACGCGTACGTACGGTGCCGGTGTGCAAGTCCGCCCAGATGTGCCCGTTGGCATAGGTGAGAAACTGCACATACAGGGTCTCGTTGCGCAGCAGG
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| Amino Acid Sequence |
>malate dehydrogenase
MAQNESVDVVLVGAGIMSATLAVLLKELDPTLKLEVVEAMDSGAAESSNPWNNAGTGHAGLCELNYTPQAADGSIDIKKAVHINTQFEVSRQFWAYLSKK GNFGPARAFINPVPHLSYVEGDKGIAFLKKRYELLKQHHAFAEMEYTDDKAVMNEWMPLMMPGRPADQHIAATRVLKGTDVNFGALTNKLLKLLGDAPDA QVKYCKKVVGLRRNGAGWTVSIKDVNSGGSREVDARFVFLGAGGAALPLLQASGIPESKGFGGFPVSGQWLRCDNPEIVSQHQAKVYSQAAVGAPPMSVP HLDTRVVDGKKSLLFGPYAGFTTKFLKHGSLLDLPLSVRLGNLGPMLAVARDNMDLTKYLVSEVMQSMEQRLESLRRFYPEAKAEDWRLEVAGQRVQIIK KDPKKGGVLQFGTELVSAQDGSLAALLGASPGASVTVSIMLELIERCFPEQAKGAWAAKLKEIFPAREKTLATDAALYQKISADNDAALDLVQSSPAAKH YA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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