Pseudomonas putida S610, EDP1_2102
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S610 EDP1.NODE_1753, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCCAGGTGGAGCAGCACAGCCAGGCGGTGCTGCGCGCACTGGTCGCTGCGGCCAAGGCGGACGGTCATGTGGATGAACGCGAACGTGCGCTGATCGAG GGGGAGTTCACCCGCCTGGACGGTGACCGTGAAGTGCAGCAGTGGCTGCATGCGGAGCTCGACAAGCCGCTGGACCCGGCCGAGGTGGCCCGGGCGGCCC AGACGCCGGAGATCGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTACATGGAGCGTGCCTACCTGGACGAACTGGCGCGCCA GCTGGGGCTGGCCCAGGGGTTGCGCGAGGAGCTGGAAAAGCAGGTGCGGCAGGTATAAGCCGCGCGTGCAGCTTGGCCCGATCGGGAGGATGACTGCGGT GGAGAGGCGTTCTGTCAGAATATGACACGCAATTCTGTAGGACGCCTGGGCTATACTTCGGCGATTTTTCCTGCTCGTAGTGAATCCCTGAGGGCTGAAT
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| DNA Sequence for Gene |
>EDP1_2102
GTGAAGAACTGGACGTTGCGCCAACGGATCCTGGCAAGTTTCGCCGTGATCATCGCCATCATGCTGCTGATGATCGTGGCGGCCTATTCGCGCCTGGTGA CCATCGAATCTGCCGAGCAGGAAGTAGGGGCCGACAGCATTCCAGGGGTCTACTACAGCTCGATGATCCGCAGCGCATGGGTGGACAGTTACGTCACCAG CCAACAGTTGGTCGGGCTTTCTGACCGGCGCGAGATCAGCTCGGCCGACATGGAACTCTTCAAGAGTTTCGAAGACCGGCTCAAGCAACACATGGCCAGT TACCAGACCACCATTCGCGATGGCGAGGACCAGGCCCGCTTCGACGCCTTCGTGAAACTGGAACAAGCCTACATGCAGAACGTCAACCAGGTGCTCAGTG CGTATCGCGAACGCAATTATGCCGAAGCCCAGCGGTTGATCGCCGAAGTGCTGACCCCCACCTGGGTCGAAGGGCGCAAGCACCTGAACGAGGTGATCGA ACAGAATCGCCTGTCCGCCGACGCGGCCACCCGAGAAATCGTCAGCGCGGTGAACACGGCCAAGGGCAGTATGGTCGTGTCGCTGTTGCTGGCAATCGTG GCTGCCGGTATCTGTGGCTTGCTGCTGCTGCGCGCCATCACCTCGCCCATGAGCCTCATCGTGACTGCGCTGGACAGGCTTCGCTCGGGTGACCTGAGCA TGCGCCTGAACCTGGACCGCCAGGACGAGTTCGGCGCGGTTCAAGGCGGTTTCAATGAAATGGCCGAGGCGTTGGCCAACCTGGTGGCACAGGCGCAGCG CTCGTCGGTGCAGGTCACCACCTCGGTGACGGAAATCGCGGCCACCTCCAAGCAGCAGCAGGCCACCGCTACCGAGACGGCCGCCACCACCACGGAAATC GGTGCCACGTCGCGTGAAATCGCCGCCACTTCCCGTGACCTGGTGCGCACCATGACCGAAGTCACCTCGGCCGCCGATCAGGCATCGAGCCTGGCCGGCT CTGGCCAGCAAGGGCTGGCGCGCATGGAAGAAACCATGCACCAGGTCATGGGGGCGGCCGACCTGGTCAACGCCAAGCTGGGCATCCTCAACGAGAAGGC CAGCAACATCACCCAGATGGTCGTGACCATCGTCAAGGTGGCCGACCAGACCAACCTGCTGTCGCTCAACGCGGCCATCGAAGCCGAGAAGGCCGGGGAA TACGGCCGCGGTTTCGCCGTGGTGGCCACCGAAGTGCGCCGCCTGGCCGACCAGACGGCGGTGGCGACCTATGACATCGAACAGATGGTGCGTGAGATAC AGTCCGCCGTGTCGGCCGGTGTCATGGGCATGGACAAGTTTTCCGAAGAGGTGCGCCGCGGTATGTTCGAGGTTCAGCAGGTTGGTGAGCAACTGAGCCA GATCATTCATCAGGTCCAGGCACTGGCGCCGCGTGTCCTGATGGTCAACGAAGGCATGCAGGCCCAGGCCACTGGTGCCGAGCAGATCAACCAGGCGCTG GCGCAACTGAGCGACGCCAGTACCCAGACCGTGGAATCGCTGCGCCAGGCCAGCTTTGCCATCGACGAGCTGAGCCAGGTCGCCGCCGGCCTGCGCGGCG GCGTGTCGCGCTTCAAAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCGATGATCGACATGCAACCGCGCGCCGTGCCGGCAGGCCACGACAACGGCGCGCTGTACCTGCAGTTTCACCTGGGTGACCAGCGTTTTGCCCTGTC CGTGCAGGACGTGATCAAGGTGCTGCCCCGTCAGCCTCTCAAGCCAGTGCTGCAAGCGCCGCACTGGGTAGCGGGCATTCTTGCCCACCGAGGCCAGTTG GTGCCGGTGGTGGACTTGGCTGCCTTGTGCGTGGGGCGGCCGGCGCTGCAGCGCACCAGTACCCGCTTGGTGCTGGTGCGCTATCGCAGCGTCCTGCAGC TGGGCCTGATTCTGGAGCACGCCACCGAGACCCTGCGCTGCCGTGCTGATGAATTCAAACCTTATGGCGTGGACAACGACCCCGCACCGTACCTGGGGCC TGTGCGCCAGGATGCCCAGGGGCTGGTGCAGCGCATCGAGGTCGATCAGGTGTTGCCCGAGGTCGTGCACCGTGTGCTGTACCCTGACGCACAGGGCGGG
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| Amino Acid Sequence |
>methyl-accepting chemotaxis (MCP) signaling domain protein
MKNWTLRQRILASFAVIIAIMLLMIVAAYSRLVTIESAEQEVGADSIPGVYYSSMIRSAWVDSYVTSQQLVGLSDRREISSADMELFKSFEDRLKQHMAS YQTTIRDGEDQARFDAFVKLEQAYMQNVNQVLSAYRERNYAEAQRLIAEVLTPTWVEGRKHLNEVIEQNRLSADAATREIVSAVNTAKGSMVVSLLLAIV AAGICGLLLLRAITSPMSLIVTALDRLRSGDLSMRLNLDRQDEFGAVQGGFNEMAEALANLVAQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVTSAADQASSLAGSGQQGLARMEETMHQVMGAADLVNAKLGILNEKASNITQMVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINQAL AQLSDASTQTVESLRQASFAIDELSQVAAGLRGGVSRFKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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