Pseudomonas putida S610, EDP1_1983 (cobD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1753, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGGGCTTGATGCAGCCATGGCGGTTCATCCGCATTACCGAGCGGGCCTTGCGTGGGCGCATCCAGGCACTGGTGGAGGCCGAGCGGGCGTTGACTGCAC AAGCGCTGGGCGAGCGCTCGGACGAATTCATGAAGCTCAAGGTAGAGGGCATCAACGACTGTGCCGAACTGTGGGTCGCCGCGTTGATGGACAACCGTGA ACCACACATTTTCGGGCGTCGCACACTGCCCGAAATGGACCTGGCCTCGCTCGCCTGCGCGATCCAGAACCTGTGGCTGGCCGCCCGTGCCGAAGGGCTG GGCATGGGCTGGGTATCGCTGTTCGATCCCCAGGCGCTGGCAGCGTTGCTTGGCATGCCCAGCGGCGCCAAACCCGTGGCCGTGCTGTGCCTGGGTCCGG TGGCGGCATTCTATCCTGCGCCCATGCTGGTCATGCAGAGCTGGGCCGAAGAACGACCGTTGGACGAGATGCTGTTTGAAAACCGGTGGGGAGAAGGCGC
DNA Sequence for Gene
>EDP1_1983 |cobD
ATGAGCGTGGCGTTGCTGAGCGTGGCCGGTGTGGCCCTGGATGCGTTGCTCGGTGAGCCGCGGCGGCGCCACCCGCTGGTCGCTTTCGGCAACATGGCCA GCAGCCTGGAGCGGCGCTTCAATGCCGGCGGGCGCGGTTGGCGCAGTCATGGGGTGAGCGCCTGGTTCCTGGCCGTGGTGCCGCTGACCTTGCTGGCCCT CATACTCTCCTGGCTGCCGGTGATCGGCTGGCTGGTCGATGTGCTGGCGCTGTACTGCGCCCTGGGGCTGCGTAGCCTGGGCGAACATGTGCTGCCGGTG GCCACGGCCTTGCGCCAGGGCGATCTGGAAGAAGCACGGCGGCGAGTGGGGTATCTGGTCAGCCGTGAAACCCGTGAGCTGGACGAGACGGCGGTGGCGC GGGCAGCCACCGAGTCGGTGCTGGAAAACGGCAGCGATGCCGTGTTCGCCGCCTTGTTCTGGTTTGCCGTGGCCGGGGCGCCAGGGGTGGTGCTCTATCG ACTGAGCAACACGCTCGATGCCATGTGGGGCTATCGCAACGAACGCTTCGAGCGCTTCGGCTGGTGCGCGGCGCGCATCGATGACGTACTCAATTATGTG CCGGCGCGCCTGGTCGCACTCACCTACGCAGTGCTGGGCAAAACCCGCCTGGCGCTGGCTTGCTGGCGCCGCCAGGGGCCGCTGTGGGACAGCCCCAATG CCGGCCCGGTCATGGCGGCCGGGGCAGGGGCCCTGGGTGTCGAGTTGGGCGGCCCGGCGGTCTACCACGGGCAGCTGCACGAGCGCCCGCGCCTGGGCGA GGGCCCACCGGCCAGCCCCGATGCCATCGAGGGCGGCTGGGCGTTGGTGCAGCGTGGCGTATGGCTGTGGCTGTTGGTGTTGTGTCTGGGAGCTTACCTG AATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATGGAGGCCGGCTGCTGCGTGCGGTTCGGCAATATGGCATCGCCCGCGAGCAGTGGCTGGACCTGTCCAGTGGCATTGCGCCCTGGTCCTTCCCGATA CCGCCGATCCCTATCGAAGCCTGGGCACGCCTGCCGGAAACAGACGATGGCCTTGAGCAGGCGGCGTGCAGCTACTACGGCGCCACGCGACTGCTGCCCG TGGCGGGCTCACAGGCTGCCATCCAGGCCCTGCCGCTGTTACGCAGCCCGAGCCGAGTCGGAGTGCTGACACCCTGTTATGCCGAGCACCCCTATGCCTG GCAGCGGACTGGGCACACGTTGCTTGAGCTGGATGAGCACCAGGTCGACGACGCGATCGACAACCTCGACGTGCTGGTCCTGGTCAATCCGAACAACCCC ACCGGCCGCGTCGTGCCTGCGCCCACACTGCTGGGGTGGCATCAGCGCCTGGCAGCACGCGGCGGCTGGCTGGTGGTCGATGAAGCCTTCATGGACAACA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSVALLSVAGVALDALLGEPRRRHPLVAFGNMASSLERRFNAGGRGWRSHGVSAWFLAVVPLTLLALILSWLPVIGWLVDVLALYCALGLRSLGEHVLPV ATALRQGDLEEARRRVGYLVSRETRELDETAVARAATESVLENGSDAVFAALFWFAVAGAPGVVLYRLSNTLDAMWGYRNERFERFGWCAARIDDVLNYV PARLVALTYAVLGKTRLALACWRRQGPLWDSPNAGPVMAAGAGALGVELGGPAVYHGQLHERPRLGEGPPASPDAIEGGWALVQRGVWLWLLVLCLGAYL NA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site