Pseudomonas putida S610, EDP1_2421 (mtnA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S610 EDP1.NODE_1725, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCCAGATGGGCGCGCTCGTCGATCCAGTTGACGCGCAGCGGGTTGATATCGTGCAGCGGCTTGAACTCGCTCTCGCGGTCCCACCAGCGATGGGCCAG CGCTTCGAATTTGGCGATTTCAGCGCGGTCGACGTTGCTCATTGAACAGTCCTCAGAAACGTGGGAATCAGCTTCACGTGGCAAGCTGCAAGGTGCATGA CATACAGACGGTGGCGTTGGCCCAAGGGTTCGCACGGCGTTCAGGCCCGGCTCGTGCACGCGCCGTGGGCCTTTTGCCTGGCGGGCATTGCGGTGGCTTT CTGCGTGGCCGAGTAGGCCCATGGCAGAGGGCGGACGGCGATGGCGCCTCGGCCAGCGACGCTGTGCCCAACCTTGCTTGTACTGCCGGATGTCTGCGGC GCGCAGCTTGCGCTGGAAAAGGCCGAAGTATACCCGAGCACTCGGGGCGCCGGGTCGCTATAATCGCCGGCTTTTGATACGCGAACGACGGGGAGAGGTG
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| DNA Sequence for Gene |
>EDP1_2421
|mtnA
ATGCGCGAGCAACTATTGGCGGCCGAGAAGGTGACCGGAATCCGCTGGCAGGGCGGCGTTCTGCATCTGCTCGACCAGCGCCTGCTGCCGTCCCAGGAAC ACTGGCTGGCCTGCGACACTGTCGCGCAGGTGGCCACCGCCATTCGCGACATGGCCGTGCGCGGCGCATCGGCCATCGGTATCGTGGCGGCGTATGGGCT GGTGCTGGCCGCCGAGGAGCGCCTGGCCGAAGGTGGCGACTGGGAGATGGACCTCGAAGAGGATTTCATGCTCCTGGCCGAGGCGCGCCCTACCGCGGCC AACCTGTTCTGGGCCTTGAACCGCATGCGCGAGCGCCTGCAACGCCTGCGTCCCGACGAGGACGTGCTGGGCGCACTGGAAGCCGAGGCGCTGGCCATCC ATGAAAGCGATCGCGAGGCCAACCTGACCATGGCCCAGCACGGCACCGAACTGATCCGCCGGCATCAGGGCAATGCCCAGACGCTGCTGACCTACGGCAA TGCCGGCGCCTTGGCCAGCGGCGGCTTCGGAACGGCGCTGGGGGTGATTCGCGCAGGCTTTCTGGAAGGCATGGTGGAGCGGGTGTACGCCGGCGAAACT CGCCCGTGGCTCCAGGGTTCGCGGCTTACGGCCTGGGAGCTGGCCAACGAAGGCCTGCCGGTCACGCTGTGCGCCGATTCGGCCCTGGCGCACCTGATGA AGACCAAGGGCATCACCTGGGTCGTGGTCGGCGCTGATTGCATCGCGGCCAATGGGGATGTGGCCGGCAAGATCGGCACTTACCAACTGGCGGTCAGTGC CATGCACCATGGTGTGCGCTTCATGGTGGTGGCCCCGAGCAGCAGTATCGACCTGAACCTGGAGACGGGCGACGATATCCCGCTCGAAGAGCGCGAACCG GACGAACTGCTCGACTATGCCGGCACGCGGGTGGCGCCGGAGGTGGAGGTGTTCAATCCGGTCTTCGACGTGACCCCGGCGGACCTGATTGATGTGATCG TGACCGAGCGCGGCGTCATCGAACGCCCGGATACGGCCAAGCTGGCGCAGATGATGTGCCGCAAGCGTCTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGGCGGCGCAGCCGTTTCGTTGCGCTCGACTGCCGGACACGACCCTCGGCAGGCGTTTTCCCAGGCCTGGGTGCACTACCGGGCGCGCTGTCGAACGCG GGTCTGGTGGTGCTCGCGGCTACCTTCGACCACAGCGCGCAGCACTGGGCAAGGGCAGGGATTCACTGCCCGGCTGGCCACTTGCTGCATCTCCCACTAC CCCTGCCGTTGTGGTAATATCCGGCAGTTTCCAAGACCCCGCTGTGCGGCGGTCTTCATTGCGCAGATCCATGGCACAACTCATTGATTTGTCGTAAGTC GTCGCAGGCGAGTGCACTGCGGCGGCGAGCTTCGTTCGGCCCTTGATGGCGCTGCGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTCATGGGCGAACTG GCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAACTGAGACAGTCTTACCTCGACTACGCGATGAGCGTGATTGTCGGGCGAGCGCTGCCCGATGCGC
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| Amino Acid Sequence |
>S-methyl-5-thioribose-1-phosphate isomerase
MREQLLAAEKVTGIRWQGGVLHLLDQRLLPSQEHWLACDTVAQVATAIRDMAVRGASAIGIVAAYGLVLAAEERLAEGGDWEMDLEEDFMLLAEARPTAA NLFWALNRMRERLQRLRPDEDVLGALEAEALAIHESDREANLTMAQHGTELIRRHQGNAQTLLTYGNAGALASGGFGTALGVIRAGFLEGMVERVYAGET RPWLQGSRLTAWELANEGLPVTLCADSALAHLMKTKGITWVVVGADCIAANGDVAGKIGTYQLAVSAMHHGVRFMVVAPSSSIDLNLETGDDIPLEEREP DELLDYAGTRVAPEVEVFNPVFDVTPADLIDVIVTERGVIERPDTAKLAQMMCRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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