Pseudomonas putida S610, EDP1_3645 (bvgA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S610 EDP1.NODE_1724, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGAACACCTTCTGTGGCGCCGCGCTGGAACAACAGGGTGGTCGCACGCCTTCGTTCAAGAGCCGCCGGGTGTTGGATCTGCTGGGCAACAATGCCCCCG ATCCCCATGGTTCGCTTTATCAGGCCTTCCTGCGCATGATTGATTTCATAGCCGGAATGACGGACAGCTACGCCACCGAAATGGCACGGGAGATGACAGG TCGTTCCGGTCCTGCGTGAACGCGCGCAGAAAATCGCCGACCTTGCGCCTTGAAGCGGCCCATTTGGGAAGAATCTTACTTTCAATTCAACCAACCCTGG ATTGTGAGTTGAAACCCCTAAACATCAGTTAACAAACACGGTTTGACTTTGGCTGTTCATGCAATTGTACGTAAGCAGTTTTGGTTAAGTTTGTAGGCCA TTTCCTATATACGGCTATTGAGCCATCCCCGCATTACTTGCCGCTTTCAACTGGGTTAAGGTGCCAACTGTCACCCTCATTGATAGCAGGGAAGTAAAAC
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| DNA Sequence for Gene |
>EDP1_3645
|bvgA
ATGTACTCCATATTCATCGTCGACGACCATCCGGTGATCCGGCTGGCAGTGCGCATGCTTCTGGAAAATCAGAATTACAAAATCGCTGGCGAATCGGACA ACGGCGTGGACGCCATGCAGATGATCCGCGAAACCAACCCGGACTTGATCATCCTGGATATCAGCATTCCCAAGCTCGATGGCCTGGAAGTCCTGGCGAG GTTTCAGTCGATGGCAATGTCACAGAAGATCCTCGTGCTGACCGCGCAGTCGCCGGCGCTGTTCGCAGTGCGCTGCATGCAATCAGGGGCGGCAGGCTAT GTCTGCAAGCAGGAAGACCTGAGCGAACTGCTCAGCGCAGTGAAGGCGGTATTGGCTGGGTACAACTACTTCCCCAGCCAGGCCATGCAGCCCCATTCAC CTGTTGACAACGACTTGCAACTTTTAAGCACTGTCAATGATCGGGAACTTATGGTTCTTCAACTTTTCGCACAAGGGCGGACCAATAAGGAGATTGCAAA AGGCATGTTTCTAAGCAGCAAGACGGTCAGCACTTACAAGAAACGCCTGATGCACAAACTCGAAGCCAGCACGCTGGTCGACCTGATCGACATGGCCAAG CGCAACGCACTGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGTTCCATGGCACGTTCTATCGCCCTCCTGCTCCTGGTCGCTACGCTGCTGGGCAACCTGGCGAACGCCGGGCAGCAAGGCGCGTCCCAGTTGTCCCTG GTCGCCCGCTCCACCGCGCGACCCGCCATGCCTGCGATTACGCCTGAACAGCAGCAATGGTTGAATGCTCGCCACGAACTGGTGATTGGCACATCTGCTC CGGATTATCCACCTTTCGACATCAGCAGTGGCGGGCGCGACTATCAAGGGCTCACCGCAGAGTACGCCAGTCTACTGGGCAAGGCGCTTGACCTGCCGGT CCGCGTGCTGCGCTATCCAAGCCGCCAGGCGGCGCTGCAGGCGCTCAAGCAGGGCGATATCGATCTGTTGGGCAGTGCCAACGGCTATGACGCCAACTAT GAAGGCGTGGTCCTCTCGCACGCCTATGCCATCGACCAACCCGTACTGGTCACCCGCGAAGACGAGCATCGGGCGCTGGACACTGGCCTGTCAGGCATGC
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| Amino Acid Sequence |
>virulence factors putative positive transcription regulator BvgA
MYSIFIVDDHPVIRLAVRMLLENQNYKIAGESDNGVDAMQMIRETNPDLIILDISIPKLDGLEVLARFQSMAMSQKILVLTAQSPALFAVRCMQSGAAGY VCKQEDLSELLSAVKAVLAGYNYFPSQAMQPHSPVDNDLQLLSTVNDRELMVLQLFAQGRTNKEIAKGMFLSSKTVSTYKKRLMHKLEASTLVDLIDMAK RNALV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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