Pseudomonas putida S610, EDP1_3432

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1716, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGGCTTCTGCTCTTGCTAGCGCAACGCTGAACAAGGCCAGCGGCTGAAGAAGGAATCGCCGTCGTGAGGAACATCGACAAACGCCTGGGTTACCTGTTG CTGCTGGGGTGCGTGGTCAGCTCGCTCAGCGCGACCGCCCAAGCCGATAATGGCACCATCGTCATTACCCGCGACGTGCAGCCACGCAATGCCGTGATCC CCCCACTGCGCCCAGACCCCACACCTACCACCGTCAATGCCAACCCGGTCAATCATGTGCTGCGCCAGACCAACGAGTTGAGTGACGGCGACTTCGCCAG CATCAGCAGCGGTTCAGGCATCAACGCCATGATCACCCAGCAGACCGACCACCTGGGCGGCAACCTAGGCCACCAGACCCAATTGCCCAACCTGGCAGGC GGGCGTGGATCAGGCTCGGGCAACGGGATCTCCAACATGGTCAATTCGAGCGTGCAGAAAGGCCTCGCGCCCCTGCAGATCCTGACGGGGGGCAAATGAC
DNA Sequence for Gene
>EDP1_3432
ATGAAGCCTGCCCTGCTCGTAATCACTCTGCTGTGCAGCGCGTCCGCCATCGCCCAGCCACCGTCTGCCGTCAGCAACAACGCCACCATCGACGACGCCG GCCGTGCCTATCAGGGCAACATGACGGTCAATCAGGCTGCCGGGGACATGCAGCAGCAAGCCAACGCCCGGGCGATCGCCCTGGGCCACGGCGCCAGTGC CACGACACAGATCCGGCAACGGCTCAATACGCCTGCCGACGCTGCCATGGATATCCAGGCCCAGATTGGCGGCGCCTCGTTCAGCCACGGCAGTGGCGCG CTTGGCGTGAACCAGAGCGCCGGTGCAGGCACCCAGCAGGCCAACGCCCTGCGCATCAGCGTGGGCACACAACCGCAAAGCATCGACGACAGCGTCCTCA TGCAACAGAACGTGACGCTGCTCAACACCTTTGACTCAGCTGCTACCCCGACGGGCCATCGCCAGGTCACCACCAGTGACCAAGCGTTCACCGGTGGCCG TGGCGTGGTTCAGCTGAATCAGAGTGCCGGGGTGGGAAACCGCATGGCCAACACCTTGAGCATACGGGTCGCCGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGTTTGAGTCATGAACGACACTTAACCTTTAGAGTACGGAGAATCACCATGAAACCTTCGATGGCACTCAAGCCTCTGGTTTTCGCAATTGCTGCGGTC ATGGCCGTTGCTGTACAAGCCGATCAGAACCGTCGCAGCTATAACGGCAACAGCACCACCTGGCTGCCCATCTCGGCCAAGGCCGATGCGCTGGACACCC AGCGTAGCACCGGCAACACCATCACCAACCAGGGCACCGTCAACGAAGCTGAAATGAGCAGCTCGGCAACCGGTGCCAGTGGCAACGTGGGTGTCAACGT GGCGTCTGGTAACGGCAACCAGCAGGGCAACGCGTCGGCCATCGCCAACGCCGCTGCCGACTCTACCCTGGACAACAGTTTCGTCTTCGGCACCGCGGAA GCCAACGCTGACGTCAGCCAGTACAGCAACAACAACCGTGTCGACAACTGGTCGACCCAGTCTTCGGCAGTGATGAGCGGCTCTGGCGAAGGCAGCTCGG
Amino Acid Sequence
>putative fapB
MKPALLVITLLCSASAIAQPPSAVSNNATIDDAGRAYQGNMTVNQAAGDMQQQANARAIALGHGASATTQIRQRLNTPADAAMDIQAQIGGASFSHGSGA LGVNQSAGAGTQQANALRISVGTQPQSIDDSVLMQQNVTLLNTFDSAATPTGHRQVTTSDQAFTGGRGVVQLNQSAGVGNRMANTLSIRVAD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site