Pseudomonas putida S610, EDP1_1558

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1712, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACATCGAGCCCAAAACCGGCTTCATGCTCATCGACACCCTGCTCAGCGACGAAGAGGGTTCGTTCAAGGATGCCGTGATGCACCTGATTCTGCCGGCCAT CGTACTGGGTACCATCCCGCTGGCAGTGATCGCGCGCATGACGCGTTCCTCCATGCTCGAAGTGTTGCGCGAGGACTACATCCGCACGGCGCGCGCCAAG GGGTTGTCCCCGGCCCGGGTCGTGTTCATGCACGGCTTGCGCAACGCCCTGATTCCCGTCCTGACCGTGTTCGGCCTGCAGGTCGGCACCTTGCTGGCCG GTGCGGTGTTGACTGAAACCATCTTCTCCTGGCCGGGCATCGGCAAATGGCTGATCGAAGCCATCGGCGCCCGTGACTACCCCGTGGTCCAGAACGGCAT TCTGTTGATTGCCTGCCTGGTGATCCTGGTCAACTTCGTCGTGGATATTCTCTACGGCCTGGCCAACCCACGCATCCGTCATCAGCGCTGAGGCCCCGTC
DNA Sequence for Gene
>EDP1_1558
ATGACCAACTCGACTGCAAAAAATCTGTCCCCGGCCAGCCCGGTTGACCAGAGTCTTCTCTACCCCTCGCCCTACAAAGAGTTCTGGCAGGCCTTCGCGC GCAACAAGGGCGCGGTGATGGGCCTGGCGTTCATGTGCGTGGTAGTGTTCTGCGCGCTGTTCGCCCCCTGGGTCGCACCCCACGACCCCAGCGAGCAGTA CCGTGATTTTCTGCTGACCCCACCGGTGTGGCTGGAGGGCGGCACCTGGCAATTCATCCTGGGCACCGATGAGCTTGGCCGCGACCTGCTCTCGCGCTTG ATCCAGGGGGCGCGCCTGTCCTTGCTGATCGGCTTGTCATCAGTGGTGATCTCGCTGATTCCCGGCATTCTCCTCGGTTTGCTGGCGGGCTTCTTCCCGC ACTTCGTCGGCCCTTCGATCATGCGCCTGATGGACGTGATGCTGGCCCTGCCCTCGCTGCTGCTGGCCGTCGCCATCGTCGCCATCCTCGGCCCTGGCCT GATCAACACCGTCATCGCCATTGCCATCGTCTCGCTGCCCTCGTACGTGCGCCTGACCCGCGCCGCCGTGATGGGCGAGCTGAACCGCGACTACGTCACC GCTGCCCGGCTGGCAGGCGCCGGGCTGGGGCGCCTGATGTTCGTGACCGTGCTGCCCAACTGCATGGCGCCGCTGATCGTGCAGGCCACCTTGAGCTTTT CCTCGGCCATTCTCGACGCTGCCGCCCTGGGCTTCCTGGGCCTTGGCGTGCAACCCCCGACGCCGGAGTGGGGCACCATGCTGGCCTCGGCCAGGGATTA CATCGAGCGTGCCTGGTGGGTGGTGAGCCTGCCGGGCCTGACCATCCTGCTCAGCGTACTGGCGATCAACCTGATGGGTGATGGCCTGCGCGATGCGCTC GACCCCAAACTCAAGAACGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGCACACCCATGTCTTTGTTGCAGATCAACAACCTCAACGTGCGTTTTGGCGACGCGGACGCCGTGCCAGTGGTGGACGGGCTGGACTTGCAGGTTGA AGCCGGCGAAATCCTGGCCATCGTCGGCGAGTCCGGCTCGGGCAAATCGGTGACCATGATGGCCCTGATGGGCCTGGTCGAAGCCCCTGGCAGGATCACG GCCGATGCCATGACATTCGACGGTACCGACATGCTCACCCTCAGTGGCCGGCAACGGCGCAAGGTGGTGGGCAAGGACATCGCCATGGTCTTCCAGGACC CGATGACGGCCCTGAACCCCAGCTACACCGTGGGTTATCAGATCGAAGAAGTGCTGCGTCAACACTTGGGCCTCAAAGGCAAGGCGGCGCGGCAACGGGC CCTGGAGCTGCTGCAGAAGGTCGAGATTCCGGCCCCCGAGAGCCGCCTGGATGCCTACCCGCATCAACTGTCCGGTGGCATGAGCCAACGGGTGGCCATC
Amino Acid Sequence
>binding--dependent transport system inner membrane component family protein
MTNSTAKNLSPASPVDQSLLYPSPYKEFWQAFARNKGAVMGLAFMCVVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRL IQGARLSLLIGLSSVVISLIPGILLGLLAGFFPHFVGPSIMRLMDVMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVT AARLAGAGLGRLMFVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDAL DPKLKNAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site