Pseudomonas putida S610, EDP1_2798
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S610 EDP1.NODE_1706, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGCGCCCTTCGGCTCAATGCTGGCAGGTGGGGCTGAACAATCTTCAGTGCCTCAACCAGGCGGTGAGCCAGGCCCAGGGGATCGAGGCACGACACAGCG CAACGGCCCGTCAGGCAATGATCGAAAGCAAGCTGTGCATTCATGTGCTGGTGGCGGAGGACAATGTCATCAACCAGTTGATACTGCGGGACCAACTGGA GAAGCTCGGCTGCACGGTCACCCTTGCCAACGATGGCGAGCAAGCGCTGGCCCTGTGTCAGAAGGAGGTCTTCGACCTGGTGCTGACCGATGTGAACATG CCCAGAATCAACGGGTATCAGTTGGCGCAGAACTTGCGCCAACAGGGGTATGCCCTACCCATCATCGGCGCAACTGCCAACGCCATGCTCGATGAGGCAG AGCGTTGCCTGGGCGCCGGAATGGATCAGTTTCTGGTCAAGCCCTTCACTCTGCACGCGCTCTATCAGTGCCTGCTGCCGTATCGCAAGGGTTCGGCCTG
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| DNA Sequence for Gene |
>EDP1_2798
ATGATCCACCGCGTCTTGATCGTCGAGGATCACCCCTTTCAACACCAGTACTTGGCTCAGCTGTTCCGGTCCGTCGGTGGGTTCGACGTCGAGCTGCAAG CCGATGCCAACCTGGCGTTCGAGCAGTTGCGCAATCAAGCCTTCCACCTTGTCGTCACTGACCTGATGATGCCGCAACTGGATGGGGTGCAGTTCATCCA GAAAATGAGCCTGCTACCGTCGCCTCCGGCGCTGGGGCTGATGACCGCTGCCTCTGCGCGCGTGCTCGCAGGCGTTGGCAAGGTCGCCGAAAACCTCGGT ATCCGCCTGGCCGGCATGATCAGCAAGCCCGTGCAGGGTCATCATGTCGCTGCACTGCGCCGCTACATGGATAGCGCCTGCGCTCAAGGCCACTTGCAAC CTCGATCCTGTTCCGGTGGCCATTCGATCAGTGCGCTTACCCGTGCACTGCAGGCGGACGAGATCCAGGCGTGGTTTCAGCCCAAGAAATCCATGCTCGA CGGCAGGATCGTCGGTGCCGAGGCCCTGGCCAGGTGGCTGCATCCGGTCGACGGTCTTTTGTTGCCGCGGGCATTTCTGGCCGATTTGGAATCTGCAAGG CTCGATTTGCAGTTGCTGTACAACATGCTTGAGCAAACGCTCACCGCTCAATCACGCTGGGCCGCAGCAGGATACAGGCTGCCGGTCTCGATCAATCTGC CTACACACCTGCTGGACCGTCCTGATCTGGTCGACACGTTGCACCAAACGGTTCGAGAGCGAGGTGCCGACCCCAGGACCATCACCTTCGAGCTGACCGA AACGTCGACCACCCGGCGGTCCAGTGATTACTTTGCAGGGACGTGCCGGCTGCGCATGCTGGGCTTCGGCCTAGCCCAGGATGATTTCGGCAAGGGGTAC AGTTCCTATTCCAACCTGGTATCCACGCCCTTCACCGAAATGAAGATTGATCGCTCTTTGGTCAGTGGTTGTGCGAGCAACCCCGACATGGCCATCGCCT TGGCCAGTGCCGTCCACCTCGGGCGCGCATTGGGGCTCGTGACGGTAGCAGAAGGTGTTGAAACGCGGGATGAGTTGGAAGTTGTCCGCAAGGCTCAGTG TCACCAGGTGCAGGGGTTCATCATCTCCCCAGCTGTGGAGCGAGGCGGCATGCTCACATTGCTCAACGGACAGCTTTCTGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGATAAGTTATCGAAGAAACGTTTCAGCATCTACAATATGCCGCCTCATGGCATGAATTTTGTGTCTGTTTGAGCACTCTCATCTTCATAAAATGATG TCGACGATCAACACCATGAAAAATGCCAGCTTGCGCATGGACAAACTTGCGCGCAGCTCTCAGCGCCTTAACAAAGCCATCTTGCTGCTCAGTGGGCTCA TGCTGCTGTTGTCCAGTACCTGTTATTGGGCAGTATCGCGCCTCCTGGAATCGGAACAGCAGCGGTTGGAGCTCCATTTTGCCCGGGTGATCGAAATCAT CCATGAGCATGAGATCTTCCTGCGCAATCTTGCCAACAGCATGCCAGCCGGTCGCGAGCTTCCTGCGCCGGTGGAGCAGGGCGTCATGGTGATCGATTCG ACGAGCGTCGATGGCAAGACACTGGTCAAGGCAAAAGGCTTCGAACTCTCCTTACCCTTCACCCTGGCCTACACCGGCGATTTTCGGGCCCAGGAGATAC
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| Amino Acid Sequence |
>response regulator
MIHRVLIVEDHPFQHQYLAQLFRSVGGFDVELQADANLAFEQLRNQAFHLVVTDLMMPQLDGVQFIQKMSLLPSPPALGLMTAASARVLAGVGKVAENLG IRLAGMISKPVQGHHVAALRRYMDSACAQGHLQPRSCSGGHSISALTRALQADEIQAWFQPKKSMLDGRIVGAEALARWLHPVDGLLLPRAFLADLESAR LDLQLLYNMLEQTLTAQSRWAAAGYRLPVSINLPTHLLDRPDLVDTLHQTVRERGADPRTITFELTETSTTRRSSDYFAGTCRLRMLGFGLAQDDFGKGY SSYSNLVSTPFTEMKIDRSLVSGCASNPDMAIALASAVHLGRALGLVTVAEGVETRDELEVVRKAQCHQVQGFIISPAVERGGMLTLLNGQLSE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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