Pseudomonas putida S610, EDP1_3363 (rbfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1702, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCTGGATATGCGTTACTACAACGTGATCTACGACATCATCGAAGACGTCAAGAAAGCCCTGACCGGCATGCTTGGCAGCGATGTTCGCGAGAACATCCT GGGCGTTGCCGAAGTGCGTGACGTGTTCCGTTCGCCGAAGTTCGGCGCCATCGCTGGCTGTATGGTCATCGAGGGTACCGTGTACCGCAACCGTCCGATC CGCGTACTGCGCGACGACGTGGTCATCTTCGAGGGTGAGCTGGAATCGCTGCGTCGCTTCAAGGACGATGCCGCCGAAGTGCGTAACGGCATGGAGTGTG GTATCGGCGTGAAGAGCTACAACGACGTCAAGGTCGGCGACAAGATCGAAGTGTTCGAGAAAGTCCAGGTGGCTCGTACCCTTTAAGGGTGAGCAGGCTG CAAGCGCCCTGGCGGGCGCTTTGCAGCACCTCTTCAGGCAGCGCCCGGTCAGGCATCGTTCTGACCGGGCGTTTGCCGCTTTACGTTACAGGTAACAAGA
DNA Sequence for Gene
>EDP1_3363 |rbfA
ATGGCCAAAGAATATAGCCGTACCCAACGCATTGGCGATCAGATGCAGCGCGAGCTGGCCGAGCTGATCCGTCGTGAAGTCAAGGATCCGCGTGTCGGTC TGGTCACCATCACTGCCGTGGATGTGAGCCGCGACCTGGGTCATGCCAAGGTGTTCATCACCGTGATGGGTGAAGAGACCCCAGACGCCGTGCAGCAGTC GCTCAAGGCCCTGAACAGCGCCGCCAGCTTCCTGCGCCTGCACCTGGGTCGCTCCATGCAGCTGCGCAGCGTGCCGCAACTGCACTTCCACTTCGACGAG AGCGTCAGCCGTGGCGTGCACCTGTCGGCATTGATCGAGCGTGCAGTGGCCGAAGACCGCCTGCACAAGGATGCCGACGAGTCTGGCACCAAGGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGTGGCCCAGGTCAAACGCATTCGCCGCAACGTCAGCGGCATCATCCTGCTGGACAAGCCCTTGGGCTTCACTTCCAACGCGGCCTTGCAAAAGGTGC GCTGGTTGCTCAATGCAGAGAAAGCCGGTCACACCGGTAGCCTCGACCCGCTGGCCACCGGCGTCTTGCCGCTGTGCTTCGGCGAGGCCACCAAGTTTTC GCAGTACCTGCTCGACTCCGACAAGGGCTACGAGACGGTCATGCAGCTGGGCCAGACGACCAACACCGGCGACGCCGAGGGCGAGGTGCTGCGCACCCGC GAGGTGACCGTTGGTCGCGCCGAGCTGGAAGCCGCGCTGCCCGGTTTTCGTGGCCCGATCAGCCAGATACCGCCCATGTACTCGGCTCTCAAGCGTGACG GTCAGCCGTTGTACAAGCTGGCGCGTGCAGGAGAGGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTAGCCGTCTTGAACTGCTCGAGTGCGAAGGCAC
Amino Acid Sequence
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELAELIRREVKDPRVGLVTITAVDVSRDLGHAKVFITVMGEETPDAVQQSLKALNSAASFLRLHLGRSMQLRSVPQLHFHFDE SVSRGVHLSALIERAVAEDRLHKDADESGTKE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site