Pseudomonas putida S610, EDP1_576

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1552, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGAAATTCAGCAGATCGCCGATCCGCGCACCTTGTATGAAGCACCCAGCAACACGTTCGTCGCCAACTTCATCGGTGAGAACAACCGCCTCAACGGCACC TTGCTGAGCCATGACGGTAACCGCTGCCAGGTGCAGCTGGCGCGCGGCGAGCGGGTCGAAGCCTTGGCGGTCAACGTGGGCCAGCCAGGCGAAGCGGTGA CCCTGTCGATCCGCCCGGAGCGGGTACGGCTCAATGGCCACAGTAAGCACTGCGCCAACCGCTTCTCCGGCCGTGTGGCCGAATTCATCTACCTGGGCGA CCACGTGCGTGTTCGCCTTGAGGTGTGTGGCAAGGCCGACTTCTTCGTGAAGCAGCCCATTGCTGAACTCGACCCGGCGCTGACCGTGGGCGATGTGGTG CCACTGGGGTGGGAAGTGGAGCACGCCCGTGCACTGGATCCGATCACCGAAGCCCATTGATGGTTTGCAGCACCAACCCTGAACTGTGGAGAGAATAATA
DNA Sequence for Gene
>EDP1_576
ATGCGCAAGCAGTTGAAACTGACCGCCCTGGCCCTGGGGCTGTTCGCCGCTGGCCAGAGCATGGCTGCGGACCTGACCGTGGTCTCGTTCGGCGGCGCCA ACAAGGCCGCCCAGGTGAAGGCGTTCTACGAGCCGTGGGAAAAGGCCGGCAAGGGCAAGATCGTCGCCGGTGAATACAACGGTGAAATGGCCAAGGTCAA GGCCATGGTCGACACCAAGAGCGTCTCCTGGAACCTGGTCGAGGTGGAATCACCCGAACTGGCCCGAGGCTGCGACGAAGGCATGTTCGAAGAGCTCGAT CCTGCGCTGTTTGGCAATGAGGCCGACTACGTGCCAGGCGCGATCCAGCCTTGTGGTGTCGGCTTCTTCGTCTGGTCGACGGTGCTGGCCTACAACGCCG ACAAGCTCAAGACCGCCCCGAGCAGCTGGGCTGATTTCTGGGACACCGAGAAATTCCCAGGCAAGCGCGGCCTGCGCAAAGGTGCCAAGTACACCCTGGA ATTCGCCTTGATGGCCGATGGTGTGGCGCCCAAGGACGTGTACAAGGTGCTGGGCACCAAAGAGGGCGTGGACCGCGCCTTCAAGAAGCTCGACCAGCTC AAGCCGAGCATCCAGTGGTGGGAAGCCGGCGCCCAGCCGCCGCAGTACCTTGCCTCGGGCGACGTGGTCATGAGCTCGGCCTACAACGGGCGCATCGCGG CGGTGCAGAAGGAGAGCAACCTGAAGGTGGTGTGGAACGGCGGCATCTATGACTTCGATGCCTGGGCTATTCCCAAGGGCGCCAAGAACAGCGACGAGGC GAAGAAATTCATCGCCTTCAGCGTGCAGCCTGAACAGCAGAAGATCTATTCCGAAAACATCGCCTATGGCCCGGCCAACAGCAAGGCGGTCGACCTGCTG TCCGAAGAGGTCAAGAAAGACATGCCGACCACGCCTGAGAACATCGCCAACCAGGTGCAAATCGACGTGGCCTTCTGGGCGGACAACAGCGAGCAGCTGG AGCAACGTTTCAACGCCTGGGCGGCGAAGAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTCCAGTGCAAGGGGCTGCGCTGTGGCCCCTCTTTCAGTGTGTATCGTGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCCGGTCCCA ATCTCAAACAGCGCCTTAAACACGCCGAGCGGGTCAACCGCTGGAAGGCCCAGGCGCTGATCGCGCCCCTGGCGCTGTTTCTGCTGCTGGTGTTTCTGGT GCCGATTGCAGCCTTGTTGTACAAGAGCGTCGGTAACCCGGAAGTGGTCGCCGGCTTGCCGCGCACGGTCGATATCATCACCCAGTGGGATGGCAAGGGC TTGCCTGGCGAGGACGTCTACCAGGCGTTGAGCCAAGACTTGGCCGAATCGCGCAAGAACCAGACCCTGGGTGACCTGTCCAAGCGCTTGAACATGGAGC TGGCCGGCTACCGCAGCCTGTTGGCCAAGACCGCCCGGGCGCTGCCCTTCAAGACCGAGCCTGCCTCCTACAAGGACGGCTTGCAGACGCTGGACGAGCG
Amino Acid Sequence
>bacterial extracellular solute-binding family protein
MRKQLKLTALALGLFAAGQSMAADLTVVSFGGANKAAQVKAFYEPWEKAGKGKIVAGEYNGEMAKVKAMVDTKSVSWNLVEVESPELARGCDEGMFEELD PALFGNEADYVPGAIQPCGVGFFVWSTVLAYNADKLKTAPSSWADFWDTEKFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLGTKEGVDRAFKKLDQL KPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPKGAKNSDEAKKFIAFSVQPEQQKIYSENIAYGPANSKAVDLL SEEVKKDMPTTPENIANQVQIDVAFWADNSEQLEQRFNAWAAKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site