Pseudomonas putida S610, EDP1_338

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1552, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCCTGGCCCGGGATGGCGAGCGTGATGCGGTGTTCAACGTCTACGAATCCCTGTTGGCTGGCACCACCAGTGATGCCAGCGTGGTGGTCAGCCTGCTGG ACGATCCCAAGGTGCAGGCCCGTGGGGCGGTGAGGGAAATCACACCTACCGTCTCGGCCCAGAGCGGTACGGTACAGGTCAAGGTCGGTCTGCAGGACGT TCCGCCTGCCATGCAGCTGGGCGCGCCCGTCACCGTGACCACCCAGGGGCGGGGCAAGCCGAGTGTCGAGCTGCCCTGGTCGGCGCTGACCAAAGGCTTG AAAAAGCCTGCGGTGTGGATCGTGGGCGAAGGCGACAAGGTGCAGTTGCGGGAGGTCGAAGTGAGCCGCTACCTGACCGGCACCGTGGTCATCGGCAAAG GCCTCGACGGTGGCGAAGTCGTCGTGGTAACCGGCGGGCAGCTGCTGCACCCCGGCATGAAAGTTGAAAAAGTATCCGCCAAAGCGCCGGAGAGCCCGCT
DNA Sequence for Gene
>EDP1_338
ATGAAGCCTTGGCTGACGCTGATATGTGCCGGTGTGTTGCTTGTCGGGTGCGGCAAGGAAGAGCAGCCGCCAGAGCCGGTTCGCCCGGTGCTGTCCGTCG TGGTGCAGCCGCAGTTGCAGGCCCGCTTGGGCCGTTTTGCAGGTGTGATCGAAGCGCGCTACGAAAGTACCTTGGGCTTTCGCGTAGGCGGTCGTATCGC TCGCCGCTGGCTGGACGTCGGTGCCCAGGTCAAAGCGGGCGATACGCTGGCCACGCTGGATCCGACCGACCAGCAAAACCAGCTGCGTGCAGCTGAAGGC GACCTGGCCAGGGTGCAGGCGCAGTGGATCAACGCGCAGTCCGACGCCCGTCGGCAACAACAGTTGTATGACCGCGGCGTCGGTGCTCAGGCCCAGCTGG ACATTGCCCAGACCAACCTGAAAACAGCCGGCGCCACGCTGGAGCAGGCTCGATCTTCGGTCAGCCAGGCCCGTGATCAGCTCGGTTACACCACGCTGCG CAGCGATCATGCGGCGGTGATCACCGCCTGGCAGGCCGAGGCGGGGCAGACCGTCACCGCTGGGCAGGCGGTGGTCAAGCTGGCCAGGCCAGACGTGAAG GAAGCGGTGATCGACCTGCCCATCGGCATTGCCGAGCAGTTGGCCCCGGACCTGACATTCACTGTCGCCTCGCAGCTCAACCCCACCGTCAATACCACCG CCACCTTGCGTGAGCTCGAACCCAAGGCCGATGCCACCACCCGCACGCGGCGTGCGCGGCTGACCTTGGCCAGCACCCCTGAAACGTTCCACCTGGGAAC TGCCGTCAGCGTCACCCTCAGCTCGCAGGTCTCCCCCCGCAGCGAGCTGCCGGCCACCGCCCTGCTCGAGCGCGATGGCAAGACCCAGGTATGGGTTGTC GACACCCAGCAGAAAACCGTCGCCTTGCGCGACGTGACCCTGATCGACCGAAACGAAGACCGCATCGTCGTCTCATCAGGCGTACAGCCTGGGGAGCGAG TGGTGATCGCCGGCGTCAATAGCCTCAAGCCTGGCCAGCAGGTCACCTTCGACGAGGATGCGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGGAAGCTTCAACCTGTCCGAATGGGCGCTCAAGCATCAGTCGTTCGTGTGGTACCTGATGTTCGTCGGTCTGCTCATGGGCATCTTTTCGTACTTCAA CCTGGGCCGCGAAGAAGATCCGTCCTTCACCATCAAGACCATGGTGATCCAGACCCGCTGGCCTGGCGCGACCCAGGAGGAAACGCTGCTGCAGGTCACC GACCGGATCGAGAAGAAGCTCGAGGAGCTCGATTCGCTCGATTACACCAAGAGCTATACCCGGCCTGGTGAATCAACGGTGTTCGTCTACCTGCGCGATA CCACCAAAGCTGAGGACATACCGCAGATCTGGTATCAGGTGCGCAAGAAGATCCAGGACATCCGCGGCGATTTTCCCGAGGGTTTGCAGGGTCCAGGCTT CAACGATGAATTCGGCGATGTGTTCGGTTCCATCTACGCCTTCACTGCCGACGGGCTGAGCCTTCGGCAGTTGCGTGATTATGTGGAGCGGGCGCGGGCC
Amino Acid Sequence
>efflux transporter, RND family, MFP subunit
MKPWLTLICAGVLLVGCGKEEQPPEPVRPVLSVVVQPQLQARLGRFAGVIEARYESTLGFRVGGRIARRWLDVGAQVKAGDTLATLDPTDQQNQLRAAEG DLARVQAQWINAQSDARRQQQLYDRGVGAQAQLDIAQTNLKTAGATLEQARSSVSQARDQLGYTTLRSDHAAVITAWQAEAGQTVTAGQAVVKLARPDVK EAVIDLPIGIAEQLAPDLTFTVASQLNPTVNTTATLRELEPKADATTRTRRARLTLASTPETFHLGTAVSVTLSSQVSPRSELPATALLERDGKTQVWVV DTQQKTVALRDVTLIDRNEDRIVVSSGVQPGERVVIAGVNSLKPGQQVTFDEDAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site