Pseudomonas putida S610, EDP1_206

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S610 EDP1.NODE_1552, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCTGACCGGTGTGGTTCGCATCACCCGCATGCGTACGTAGTCCGCCAACCGCAAGGAGTCATCATGAGCAAGACCGTCATCAACAGCGACAAGGCCCCT GCCGCCATCGGCACCTATTCGCAGGCGATCAAGGCCGGTAACACCGTGTACATGTCTGGCCAGATCCCGCTGGACCCCAAGACCATGGAACTGGTCGAAG GCTTCGAGGCCCAGACCGTCCAGGTGTTCGAGAACCTCAAGGCTGTGGCCGAAGCAGCAGGCGGTTCGTTCAAGGACATCGTCAAGCTGAACATCTTCCT GACCGACCTGAGCCATTTCGCCAAGGTCAACGAGGTGATGGGTCGCTACTTCGAGCAGCCTTATCCCGCTCGCGCCGCCATTGGCGTGGCCGCGCTGCCA AAAGGCGCGCAGGTCGAGATGGACGCCATCCTCGTCATCGAGTGATGCCCCAGGCGGCGAGCATTGCCCTCGCCGCTTTCTCTGCTGAAAGGTTCCCGTC
DNA Sequence for Gene
>EDP1_206
ATGCGCATAGCTTTGCCTCTCACGCTGGCAGCCCTGGTCCTGGGCGGCTGCGCCAGCCACAAACCTGAAGACTTCAACGGCACCTGGATCAATCAGGACG CCATCACTGCGGCCGTCAAGCAAGGCAACCTTCGCCAGGCCCTGAACGAGCATGGCCCGGTCTTCGAGTGGAAGCTCGATGTTGCCACCCAGCGTGCCAG CTACAGCAATGGGTTCGAGGCCTCGGACGGTCAGCTCAGCGCCAATGACAAGCAGTGGCTGGCCACCTTCGAAGGCGGTGCCACCGAGCAATTGTCGCTG GACGGCGACGAACTGCAAACGGTCGACCAGCAGGGCGGCAAACAGCGCTTCGAGCGCGCCAAGGCGCCCAGTGGCAACAATGCACCACTGGGCAGCAGCT TCGAGCAAGCGCTGTACCAGGCCTACCTCGGCGGTGCCTGGACAATCATGGAGGGCCCAGGCAAGGGCGCCAACGTGACGTTCAGCGACAGCGGCAACGT CACCGGCCTGCCCGGTCCGGATCGCTTCGCCCTGTGCCTGGCCGGTGATTGCGCAACGATGGGCGGCAGTAATGACAGCCTGTGGCTGGAGCGCAACCAG CGCGGGGCGCCATTCATCATCAAGCGCAATGGCAACCAGCTGGAAATCTTCCAGGCGGTAAACCGCGCCCAGCCAGATGAAATGCCCATGCTGGCAGCCG GCAAGCGCCAGTGGCTCCTGCAACACAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTACCTACCCAGCCTACGCTCAGGTAGCACGCAGGCTAACTGAGCGTAGGCCAGGCGATCATTGCCCGAGAATTGCGCCGTAGCCTTCCTTGTAGCTG GGGTACTGCGGCGACCAGCCTAGCCCCCGTGCACGGGCATTGCTGCAGCGCTTGCTGCCCGTACGGCGCACGCGCTCTTCATCAGACCACTGCGTGACCC CCAACTGATGACGCAGCCAGGCCACGACTTCGGTCAACGGCGCCGGGCTGTCGTCCACGCCGATGTAGCAATCGTCCAGCGCCTTGCCTTCGCTGTCACA TTGCAACAGGAACGCAAGCAGACTGGCAGCATCGTCCACGTGGATACGGTTGCCATACAAAGGCGGGTGCTCGGCGACGCGATAACCCTGACGAACCTGA CGCAACAGCCACTCGCGGCCTGGCCCATAGATGCCGGTCAGGCGAACCACGCTGGCTGGGACAGCACCGGACACCGCCAGTTGTTCAGCCTCGAGCATGA
Amino Acid Sequence
>putative lipoprotein
MRIALPLTLAALVLGGCASHKPEDFNGTWINQDAITAAVKQGNLRQALNEHGPVFEWKLDVATQRASYSNGFEASDGQLSANDKQWLATFEGGATEQLSL DGDELQTVDQQGGKQRFERAKAPSGNNAPLGSSFEQALYQAYLGGAWTIMEGPGKGANVTFSDSGNVTGLPGPDRFALCLAGDCATMGGSNDSLWLERNQ RGAPFIIKRNGNQLEIFQAVNRAQPDEMPMLAAGKRQWLLQHN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site