Pseudomonas aeruginosa PAO579, A161_22323
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO579 Contig14, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCGAAGCTGCTGGAGCTGCACGCGGACATGCGGGTGGTGATCCTCACCGGCTATTCCAGCATCGCCACCGCGGTGGAGGCGATCAAGCGCGGCGCCTG CAACTACCTGTGCAAGCCGGCGGATGCCGATGACGTGTTGGCCGCGCTGCTCTCCGAGCACGCCGACCTGGACACCCTGGTGCCGGAAAACCCGATGTCG GTGGATCGCCTGCAATGGGAGCACATCCAGCGCGTGCTCGCCGAGCACGAGGGCAACATCTCCGCCACCGCCCGCGCCCTGGGCATGCATCGACGGACCT TGCAGCGCAAGCTGCAGAAGCGGCCGGTACGGCGCTGAAGCGTAAATGACAACGGGGGCGCCGCATGGCGCCCCCTATACTTTCCGCTTTCCGTCGAATC GCGGTGGATTTCGCACATTCCGCCGGTCGCCGGGGATATCCAGCGGACAGCGCAATCGTTAAGATGCAACTTTCATGAATCGCACGACCAGGGATTGATC
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| DNA Sequence for Gene |
>A161_22323
ATGCGTATCTTCGGTTCGAGTGCCGGCTGCCTGTCGGTGCTGTTCGGACTGGCCTTCGGGCTGCCTGCACTAGCCGAGCCTTCGGTGGACCTGGATGGTC CGACGGCAGGCTGGCGCTATTCCGGCCTGCTCGAGCAGCCCGATGCCCCGCGTGTCGCCTATCCGACTCCGCCCATCGATCGCGGCGGCCAGCGCGGCCG CAGCCTGATCGAAGGACACCTGCGCGAACTGGTCGGCACCGAGCGCGCCCAGCGCCTGGTGGTCAACGGCAATCCTCTCCCTCTCTATACCGACGGCGCC GGGCGCTTCGTCCGCCCCTATGCGTTCGGCCACGGCTCCAACGGCGTCCAGGTCGGCAGCGCCGACGGCAAGATCCTCAAGCGCGTACAGTTCTACGAGG CCAATCGCTCCCAACTGCCGCCGCGCGTGCGCGTGGTGCTGGGTTGGGACGATCCGAAGGCCGAGCTTGACCTGCATATCGTCACCCCCGATGGCCAGCA CGCCTACTGGGCGCATCCGCGCCTGAGCAACAGCGGCGGCCTCGATCCGGACGGCGTCGACGGGCCCGGCCCGGAGATGTTCACCATGGGCGCGCCGCTG CACGGCACCTACCTGATCTACGTGAACTACTGGGGCAACCTCAACAACCAGGGCTACAACTTCCAGGCCGGCAGCAACGTACAGGACGTGATCACCGCGC AGGTCAACCTGGTGTTCAATGAAAACAGCGTCGACGAGAAGCACGAGACCTTCGTCGTGCCCCTGCGCACCATCGGCGACCTGGTGCTGGTCAAGACCTT TACCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCATCCCCTCGTACGGATGACACGGGATTAGCGAACCATGAGCGAGAACAACACCCCCAGCCCTGCCAACGGAACCCCTGCGCCCGCCGCTGCGCGCAC CCGAAGCGCCCTGTGGCCGGTGCTGGGGATCGTCGCCGCGCTGGCCGCCGGCGGTGTGCTGGCCTGGCAGATGGGCTGGCTGGAGCGGCTCGGCGGAGGG CGCCCGGCCGAAGAGGACCTCGGCCAGCCGATCGGCGCCCAGGCACCCGCGGCCGCCGACGCGCCACGTGCCTACCGTGACCTGCGCAAGCCCGACGCGC TGATCGAGAGCGTGTCGCTGAGCCGCCTGCCGAAGGAAATCCTCGAGGTGCCGTTGCTGCGCGATACCCTGACCGAGGACTTCGTCTTCTATTACGAGAA CAATGGCGACCGCCTCGGCCTGACCGGTACGTTGCGGCGGATCATCTACGAGCACGACCTGACCCTGAAGGACAGCCTGGTCGAGGAACTGCTCGACCAA
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| Amino Acid Sequence |
>signal peptide protein
MRIFGSSAGCLSVLFGLAFGLPALAEPSVDLDGPTAGWRYSGLLEQPDAPRVAYPTPPIDRGGQRGRSLIEGHLRELVGTERAQRLVVNGNPLPLYTDGA GRFVRPYAFGHGSNGVQVGSADGKILKRVQFYEANRSQLPPRVRVVLGWDDPKAELDLHIVTPDGQHAYWAHPRLSNSGGLDPDGVDGPGPEMFTMGAPL HGTYLIYVNYWGNLNNQGYNFQAGSNVQDVITAQVNLVFNENSVDEKHETFVVPLRTIGDLVLVKTFTY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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