Strain | Pseudomonas aeruginosa PAO579 Contig13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCGGCGCCTTCCTGCCCAGCGCCGAGGCCCTGCAGGCCTACCGCGTGCTGGCGCCGCAGGCCTACCCGGAGATCAAGAAGACCATCGAGCAGGTGGTC GCCAGCGGCCTGATCTACCTGCCCTCCGGCGTTCGCGACCTGCACAATCCGCAACTCGACAAGTATCTCTCCACCTATTGCCGCGGCTCCGGCGGCATGG GCCACCGGGAGCGGATCAAGATCCTCAAGCTGCTCTGGGACGCCATCGGCAGCGAGTTCGGCGGCCGCCACGAGCTGTACGAGATCAACTACGCCGGCAG CCAGGACGAGATCCGCATGCAGGCCCTGCGCCAGGCGATCGGCAGCGGGGCGATGAAGGGCATGCTCGGCATGGTCGAGCAGTGCATGGGCGACTACGAC GAGAACGGCTGGACCGTGCCGCACCTGCACAACCCGGACGACATCAACGTGCTCGATCGCATCCGCCAATGACGCCCGCGTCGCCTCGGAGGTTATCCCC
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DNA Sequence for Gene |
>A161_20235
ATGTCCCAGCTCGAACCCAGGCAGCAAGCCTTCCGCAACGCCATGGCGCATCTTTCGGCGGCGGTCAACGTGATCACCAGCAACGGCCCGGCCGGACGCT GCGGGATCACCGCCACCGCGGTCTGCTCGGTCACCGACAGCCCGCCGACGCTGATGCTCTGCATCAACCGCAACAGCGAGATGAACACGGTGTTCAAGGC CAACGGTCGACTCTGCGTGAACGTCCTCAGCGGCGAACATGAAGAGGTGGCCCGCCACTTCGCCGGCATGACCGAGGTCCCGATGGAACGCCGCTTCGCC CTCCACGACTGGCGCGAGGGCCTCGCCGGGTTGCCGGTGCTGCACGGCGCCCTGGCCAACCTGCAGGGACGCATCGCCGAGGTCCAGGAGATCGGCACCC ACTCGGTGCTGTTGCTGGAACTGGAGGACATCCAGGTCCTCGAACAGGGCGACGGCCTGGTCTACTTCAGCCGCAGCTTCCATCGCCTGCAATGCCCCCG GCGGGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGCGCCTCCAGGAATCCTCCGCCAGCGTTTCGAAGCCGCCGCCGAGAACCCGGCCAGGCCCTCAGCGGCGGTGCGCCGGCGGGATCGAGTAAGTGCCG ACCACATGGGCGACCGGTTCCGCGTCGCCTTCGGAGAACAGCGAGACCTCGCCCATCGCCAGGGTCTTGCCGACCTTCATCAGGCGGCACTCGGCGACCA CCCGGCGGTCCGCCGCGGGACGCCGCAGGAAGTTGATGGTCAGGCTGGTGGTCACCGCCAGCGGGACGATGCCGATCTCGCCCAGTACCGCCACGTACAG CGCGACATCGGCGATGGCCATCAGGGTCGGCCCGGAGACCGTGCCGCCGGGGCGCAGGTCGCTGGCGTCGACCGCCTGCCAGACCGTGGCGCTACGCTCG CCGACGGCTTCGACCACGACCCGGGTCTGGGGAAATTCGCGCTGGATGAAACGGGCGATCTGCTCTTTCTTGTCGGTCACGGAACGGGTCCTTGGCAGTA
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Amino Acid Sequence |
>MFS transporter
MSQLEPRQQAFRNAMAHLSAAVNVITSNGPAGRCGITATAVCSVTDSPPTLMLCINRNSEMNTVFKANGRLCVNVLSGEHEEVARHFAGMTEVPMERRFA LHDWREGLAGLPVLHGALANLQGRIAEVQEIGTHSVLLLELEDIQVLEQGDGLVYFSRSFHRLQCPRRAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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