Pseudomonas aeruginosa PAO579, A161_19870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO579 Contig13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCGAGGTTCGCCAGGGCCTGCTGGCCTACCGCTGGCCGGGCAACGTCCGGCAGATGCGCACGGTGCTGCGGACCCTGGTGGCACTCTGCGAGGACGGC CGGGTCGGCCTGCGCGACCTGCCCGCGGATATCCGCCAGGCCCTGGCGGCGCTGCCGCCCGCTGCAGCGGCGCCCGCCCCGGCCGCGGGCAACAGCCTGG ACGACGCCGAGCGAGCCGCGTTGCTGGCGGCGCTGGACGGCCAGCGCTGGCACGTGAGCCGGGTGGCCGAGCAACTGGGGATCAGCCGCAACACCCTGTA TCGCAAGCTGCGCCGGCACGGCCTGGTGCGCGGTCAGGCCTGACGGGCGGGACGGCTCCAGGCGGGCCGCCGCGAGGCCGGCGGGAACCCCGCCGACGCC GCGTCGTCTGATGCCGCGACGCCGGGCGGCCGGCGCCTCCGCTGTGCTAATCTGCCGCCCATTCACAGCGCCTTCGACGGCTTGATCTGCAGGAGTCTGC
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| DNA Sequence for Gene |
>A161_19870
ATGCACATCCACGTACTCGGCATCTGCGGGACCTTCATGGGCTCGCTGGCCGTGCTGGCCAAGGAACTGGGCCACCGGGTGACCGGTTCCGACGCCAACG TCTACCCCCCCATGAGCACCCAGCTGCAAGCCCAGGGCATCGAGTTGATGCAGGGCTACGATCCGGCCCACCTGGAGCCGGCGCCGGACCTGGTAGTGAT CGGCAACGCCCTGTCGCGCGGCAATCCGGCGGTGGAGCATGTCCTGAACAAGGGCCTGCCCTACGTTTCCGGCCCGCAGTGGCTGGCCGACCACGTGCTG CAAGGACGCTGGGTGCTGGCGGTGGCCGGTACCCACGGCAAGACCACCACCACCAGCATGCTCGCCTGGGTCCTGGAGCACGCCGGCATGAGCCCGGGCT TCCTGATCGGCGGGGTGCCGCAGAACTTCGGGGTTTCGGCGCGCCTGGGCGGTACGCCGTTCTTCGTGGTCGAGGCCGACGAGTACGACAGCGCCTTCTT CGACAAGCGCTCGAAGTTCGTCCATTACCGCCCGCGCACGGCGATCCTGAACAACCTGGAATTCGACCACGCGGATATCTTCCCCGACCTCGCGGCCATC GAGCGGCAGTTCCACCATCTGGTGCGCACCGTGCCGGGCGAGGGCCTGATCATTCGCCCGAGCGCCGAGAAAGCCCTGGAGCGCGTACTCGGGATGGGCT GCTGGACCCCGGTGCAGACCACCGGCGAAGGCGGCCAGTGGCAGGCGCGCCTGCTCGCCGAGGACGGCTCGCGCTTCGAGGTGCTGTTCGACGGCATCGT CCAGGGCGAGGTGGACTGGCCGCTGACCGGCCTGCACAACGTCGCCAACGCCCTCGCCAGCCTGGCGGCGGCGCGCCATGTCGGCGTGATGCCCAGCCAG GGCGCGGCGGCGCTCAGCGAGTTCCGCAACGTCAAGCGGCGCATGGAGAAGGTCGCGGAGGTCCGGGGCGTGACCCTCTACGACGACTTCGCCCACCATC CGACCGCCATCGCCACCACCCTCGACGGCCTGCGCAAGCAGGTTGGCGCCGATACCCAGGTGATCGCCATCGTCGAGCCGCGTTCCAACTCGATGAAGCT CGGCGCTCATCGCGACGGCCTGCCGGACAGCGTGCGCCAGGCCGACCAGGTGCTCTGGTACGCGCCGCCGAACCTGGGCTGGGACCTGGCCGCCACCGCC GCACAATGCGCGATACCGTCGCAGGTCTGCGATACCCTGGAGGCGATCATCGAGCAGGTGCGCCAGCAGGCCAGGCCCGGCGCGCAAGTGGTGATCATGA GCAACGGCGGCTTCGGCGGCTTGCACGGCAAGCTGGCCGCGGCGCTGGCCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGCGCGATGAGCGGTCCGGAACGCATTACCCTGGCGATGACCGGCGCCTCCGGCGCCCAGTACGGCCTGCGCTTGCTCGATTGCCTGGTGCAGGAAGA GCGCGAGGTGCACTTCCTGATCTCCAAGGCCGCGCAACTGGTGATGGCCACCGAGACCGACGTGGCCTTGCCGGCCAAGCCGCAGGCGATGCAGGCCTTC CTCACCGAATATTGCGGTGCCGCCGCCGGACAGATCCGCGTGTTCGGCCAGAACGACTGGATGGCGCCGCCGGCCTCCGGCTCCAGCGCGCCCAATGCCA TGGTGATCTGCCCGTGTTCCACCGGCACCCTGTCGGCGGTCGCCACGGGGGCCTGCAACAACCTCATCGAGCGCGCCGCCGATGTCGCCCTGAAGGAGCG CCGGCCGCTGGTGCTGGTGCCGCGCGAGGCGCCGTTCTCCAGTATCCACCTGGAAAACATGCTCAAGCTGTCCAACCTCGGCGCGGTGATCCTGCCGGCG
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| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHVLGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLQAQGIELMQGYDPAHLEPAPDLVVIGNALSRGNPAVEHVLNKGLPYVSGPQWLADHVL QGRWVLAVAGTHGKTTTTSMLAWVLEHAGMSPGFLIGGVPQNFGVSARLGGTPFFVVEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLAAI ERQFHHLVRTVPGEGLIIRPSAEKALERVLGMGCWTPVQTTGEGGQWQARLLAEDGSRFEVLFDGIVQGEVDWPLTGLHNVANALASLAAARHVGVMPSQ GAAALSEFRNVKRRMEKVAEVRGVTLYDDFAHHPTAIATTLDGLRKQVGADTQVIAIVEPRSNSMKLGAHRDGLPDSVRQADQVLWYAPPNLGWDLAATA AQCAIPSQVCDTLEAIIEQVRQQARPGAQVVIMSNGGFGGLHGKLAAALAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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