Pseudomonas aeruginosa PAO579, A161_15620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO579 Contig13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCACCGCCAGTTCCGACGAGGCCGACCGGGTGATCGGCCTGGAACTGGGCGCCGACGACTACCTGGGCAAGCCGTTCAGCCCGCGCGAGCTGCTGGCGC GGATCAAGGCCCTGCTGCGCCGCGCGCAGTTCACCCAGGTGCGCGGTGGCGACGTACTGGCCTTCGAGGACTGGCGACTGGACACGGTCAGCCACCGGCT GTTCCACGAGGACGGCGAGGAGTTCTTCCTCAGCGGCGCGGATTTCGCCCTGCTCAAGCTGTTCCTTGACCATCCGCAGCAGATCCTCGACCGCGACACC ATCGCCAACGCCACCCGCGGCCGCGAGGTGCTGCCGCTGGAGCGCATCGTCGACATGGCGGTCAGCCGCCTGCGCCAGCGCCTGCGCGACACCGGCAAGG CGCCGCGGCTGATCCAGACCGTGCGCGGCAGTGGCTACCTGCTGGCGGCGCAGGTGCGGCCGCACCTGCAGCCATGAGCGAACGGCGGCGCTGGTCGCCG
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| DNA Sequence for Gene |
>A161_15620
GTGCCGCGCTCGCTGCTCGGGCGCATGCTGCTCCTGACCCTGCTCGCGGTGCTGGTCGCGCAAGGGCTTTCCAGCCTGTTCTGGCTGTCGCACCTGCGCT CCAGCCAGCGCGAGGGCCTGCTCACCAGCTCGCGCAGCCTGGCCTACTCGATGGCGGCCAGCGTCAGCTACTTCCGTTCCCTGCCGCTCGGCTACCGTCC GCTGGTGCTCGACCAGTTGCGCAGCATGGGCGGTACGCGCTTCTTCGTCTCGCTGAACGACCGGCCGCTGGAGATGCGTGCCCTGCCGGACACGCCGAAC AAGCAGGCGGTGCTGGAGATCGTCCAGGACGTGTTGCACCAACGCCTGGGCAAGGAGGTCGAGCTGCAGGTCGAATTCGTCAGTCCCGACGAGCTGCGCC TGTTCAACGGCGCGCTGAAGCTCGACGAGCTGCCGCGTTCCTGGGCGCACTACGCGCTGACCCTGGAGCCGGTGAACCCGCCGGTGCTGGTGACCCAGAT CCGCATCGGCGAAAGCGAGTGGCTGTACATCGCCAGCCTGATGCCGGCGCCGTACGTCAGCCTGGAACCCGAGGGACTGCAACCGCAGCAGGTGCTCTCG ATCGTTTTCACCAGCCTGTTGCTGCTGCTTTTCACCGGTTTGCTGATGCATTGGCAGAGCCGTCCGCTCAAGCGCCTGGCGCGCGCCGCCCGCGACCTGG CCCTGGGCAGTCCGTCGGCAGCGCTGGAGGAGCGCGGCGCCAGCGAACTGGTGGAGGTGGCGCGCGCCTTCAACACCATGCATGAGCGCATCGACCGCTA CCTGAACGAGCGCGGGCAGTTGTTCAGCGCCATCTCCCACGACCTGCGCACGCCGATCACCCGCCTGCGCCTGCGGGTAGAACTCCTCGAGGACGAGCGC TTGCAGGAGAAGTTCGGGCGCGACCTGGACGAGCTGGAACTGCTGGTGAAGGGCGCGCTGCAGTGCGTGAAGGACACCGATATCCACGAGAACGTCGAGT CGGTCGACCTCAACCTGTTGCTCCAGCACATCGCCGAGCCCTACCTGGCCGATGGCCGGGTGGAGGTCGTCGGTCGCGCCGCGGAGCCTTATCCGGGCAA GCCCCTGGCGCTCAAGCGCTGTATCGGCAACCTGCTGGACAATGCGCTGAAATACGGCGAACGCGCCCGCCTGAGCCTGGAGGACGGGCCGGAAGCGGTG GTGCTGCACGTCGACGACGACGGCCCCGGCGTGCCCGAGCAGCGCCTGGAACAGATCTTCGAGCCGCGCTTCCGCCTGTCTCCGCGAGGGCAGGGCTACG GGCTGGGCCTGGGCATTGCGCGCAACATCGCGCACACCCATGGCGGCGAAGTCAGTTTGCAGAACCGTCGCGAGGGCGGCCTGCGGGTCAGCCTGCGCTT GCCACGCCTGGGGCTGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGGCTGGCCTGTCGGGCCCTTGAACGAGGCGGGCAGGCACGAGGTTCTCCCGTGTTCTGCGGCAGCCGCAGACAGAGGCGGAGCGGGCGCTATGGCAGT GTTTGCGCGGGCATCGATTGCTCGGGCTGAAGTTTCGTCGGCAGAAGGTTCTCGGGCCGTACATCGTCGATTTCGTCTGTCATGAGCGGATGCTGGTGAT CGAACTGGATGGTGGGCAGCATGTGGGTTCGCCGGCCGATGCCTGGCTGGAGAGCCGGGGTCCAGGGTACTGCGTTTCTGGAACGACAAGGTGCTGCCGC GCAGGGAGGTGCTGCTGGAGGTCATTCTCGTGTTGTAGGAGGTTTCTGTCGCGAAACCGCCTTGCCGAGTTCAAGTCCAGATTTTCCTGCTCTGCCTCAA TCCCAATGTAACCGCTCCGTGACAAACCCGGATCGCTTCGTTACCCGCGACGCGGAACGCTTGAATAGACTCGGAGCATTGCAAGCGCAGACTTGCTCCG
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| Amino Acid Sequence |
>sensor histidine kinase
MPRSLLGRMLLLTLLAVLVAQGLSSLFWLSHLRSSQREGLLTSSRSLAYSMAASVSYFRSLPLGYRPLVLDQLRSMGGTRFFVSLNDRPLEMRALPDTPN KQAVLEIVQDVLHQRLGKEVELQVEFVSPDELRLFNGALKLDELPRSWAHYALTLEPVNPPVLVTQIRIGESEWLYIASLMPAPYVSLEPEGLQPQQVLS IVFTSLLLLLFTGLLMHWQSRPLKRLARAARDLALGSPSAALEERGASELVEVARAFNTMHERIDRYLNERGQLFSAISHDLRTPITRLRLRVELLEDER LQEKFGRDLDELELLVKGALQCVKDTDIHENVESVDLNLLLQHIAEPYLADGRVEVVGRAAEPYPGKPLALKRCIGNLLDNALKYGERARLSLEDGPEAV VLHVDDDGPGVPEQRLEQIFEPRFRLSPRGQGYGLGLGIARNIAHTHGGEVSLQNRREGGLRVSLRLPRLGLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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