Pseudomonas aeruginosa PAO579, A161_15460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO579 Contig13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAGATCTGATCTGTCTCGTACTCGAAAAGAACTCGCAGTATCTCAGTCTACCGCCCTGCGGTGAGGTCTGCTCGAGTCCCTGCCTGGTCTTTGTGGGC TCGAGTGCTATTCGCATCTAGATGACTACACAATGCTTGGAAGGTCGGGTGGGATGGGTGTCCTGTTAGAGGGGGTGCTGAGTTACCATGTCTTACTGGT TTGGCTGGAGTCTGTAGATGGAGGCTTGGTTCATGGCATCGTGTCGCTCCCGGTTGGTCTTCGCCAAAGGTCAAGCTTTTATGGAACTACTTTCGTTTCT GATGGTCAAGATGCATTGAGGCTTTTGGCGGAGAGTTTCATGTATTGCTTGCACGTAATTCATCCTGTTGAGTTCGCTGTCGGTAATGTGTCTTCTGGGC GCTCTGTCTTTCCCTTGCTAGTGTGTAAAACTTCTAATTAAAAATTGGCTAATTATAATTGGTTTTCAATGATTGGCCGGAAGAGTAGCTGGACTTTTCG
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| DNA Sequence for Gene |
>A161_15460
ATGACTGACGAAATACAAAAGCACGGCGGTGTAGCTGGCGATATCGATCTGGTTGAGCTGGTTCGAGGATTATGGGAGGAGAAGTGGATAGTTCTTATAT TTTCTTTGCTAGGTATTTTGTTTGCAGCTATCTACGCTTTTCTCAGTACTCCTGTCTATGAGGCCCGCATAGCGATTTTGCCTCCGTCGTTGAGTGATGT GGCAGGTTTCAATCAGGGACGTACCAGGGAAACCGGGCTTGGTCCCTTCAAGGTCCAGGATGTGTACTCTGTTTTTGTTCGCAACCTGCAGGCTGATGGA ACTCGTCATCGTTTTTTCAATGAGACCTATTTGCCTTCTTTGGATGAAGAGCTTCGTTCGGTTTCGCGTGATGCGCTCTATAAAAGGTTCACTGATCAGA TAAGTATTAGTTTGCCGGGGAAAGACTTTCCGGGTCGTTATCTTGTTGCGATTGAACAGGAGGATCCGGAGCGTGCGGCGAGTTGGGTTCGTCGGTATAT AGCTGATGCGGCCGAGATTTCTATTCAGGAAATGTTGAACAATGCGCATCGCGAGATTGAGGTCAAGGCTCGAGATATTGAGCAGCGCATACAGAACTTG CGAGAGAATGCCAAGGCAAGACGTGAAGATCGTATTGTTCAGCTCAAGGAGGCGTTGAAGGTCGCAGGTGCGCTGAAATTGGAGGAGCCTCCACTGATCA GTGGGCAATCCTCTGAGGAGCTCTCGGCTATCATGAATGGAAGTCTGATGTATATGCGTGGCAGTAAGGCGATTATGGCCGAGATTCAGACATTGGAGGC GCGTAGCTCTGATGATCCTTTTATTCCGGCGTTGCGTACTCTTCAGGAGCAGCAGTTATTGCTGAGTAGCTTGCGTGTTAATTCGGAGCGGGTTTCTGTT TTTCGACAAGACGGTCCGATAGAAACGCCGGACTCACCAGTTCGTCCAAGGAGAGCGATGATTTTGATTTTTGGGTTGATAATTGGTGGTGTGCTTGGTG GTTTTCTGGCGTTGTGCCGGATTTTTTTGAAGAAGTATGCTCGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAAGAGCTAGTTATTGAAGTGGTGATGCGTTGCACGTACTTTGGTCGAGTAATTTTGTGGAGTAGGTTTTCGTTGGGTGGCTCGATTGCTGAGGGGTGA GAACGTTTCCATGCGGTGTTTCCTCAGCTCTGTCTCCTGTGCCTTGGCTCCTTGAACGCAGAGGTTAACAGTTGAGCTGTGGTTGTGGGTATGTGACGTC TGTTGCGGTGGTGTCTGGTTCCTGGTGTCGGGTGTGCGAGAAGATGCCAAGTTGCCTGGCAGGTCGTTACGTGTCGTAGCCGTATTCGAAGCTCGGCAAT CGCGGGGTGATTTACAGGACTGTGCTTAATACGGCGCAGGCTTGGTCAGGGTCGAGTCGGGTCTTCGGGTGTCAACTGGATCGTGCGAAAACCGGTTTCG TGGATGCTGATAAGCTCGGCTTGACTGGCAGTCCAGGGCGGTTACCAGGTCTGTGGAGGCGCAAAATGTATAGGAGCCTGCGTGAGCTGGGCAGGCTGAA
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| Amino Acid Sequence |
>chain-length determining protein
MTDEIQKHGGVAGDIDLVELVRGLWEEKWIVLIFSLLGILFAAIYAFLSTPVYEARIAILPPSLSDVAGFNQGRTRETGLGPFKVQDVYSVFVRNLQADG TRHRFFNETYLPSLDEELRSVSRDALYKRFTDQISISLPGKDFPGRYLVAIEQEDPERAASWVRRYIADAAEISIQEMLNNAHREIEVKARDIEQRIQNL RENAKARREDRIVQLKEALKVAGALKLEEPPLISGQSSEELSAIMNGSLMYMRGSKAIMAEIQTLEARSSDDPFIPALRTLQEQQLLLSSLRVNSERVSV FRQDGPIETPDSPVRPRRAMILIFGLIIGGVLGGFLALCRIFLKKYAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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