Strain | Pseudomonas aeruginosa PAO579 Contig13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGGAGGCGCAGGCTGACAACAGGCTTGCCGGGAGCAGGATCGCGAAGGGGCTCAGACGCCGAGCGATGGTTTTCATGAGATATCCTTATCTATACGGGC CAATGACTTAAGGCGAGTGCGGGAAGAATCCTAATCTACTCCTTGCGGATTCCCAAGGAGCGTTCGTCCCGCGCGTAGGAAGGAGCGTTTGAGTCGAGCG CGTCACAGCCTGTTGCTGCAATCCTGGGTACTCACATGCGTTCGAATGCTGGCGAGCCAGTGCGTACTGCGTTGGTGATGGCTCGCTGCGGGTAGAGTTC GTGCCGGTCATCGAGGGCTGGCTGCGTGGGGGCGCAATGAAGACGCGCATCCCAGCTCTTCTGGCGATTCGTGAGTGCGGATCAAATCTGTTTTACCGCC GTACGACTTTTTCCGTTCCCTGCGCCTATCTAACCTGCCGCTCTCTTCAACCCGGGATCGGCAGGCATATCCGCTGCGGTTCCAGCATGTACGGAACACC
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DNA Sequence for Gene |
>A161_12465
ATGAAAAACATTCTCCTGCTCAACGGCGGAAAGCGTTTCGCCCATTCCGACGGTCGCCTCAACCAGACCCTGCACGAAACCGCCCTGGCCCATCTGGACC GCCGTGGCTTCGACCTGCGCCAGACCTTCATCGACGGTGGCTATGATATCCCGACGGAGGTGGACAAGTTCCTCTGGGCCGACGTGGTGATCTACCAGAT GCCCGGCTGGTGGATGGGCGCCCCGTGGACAGTGAAGCGCTACATCGACGAAGTCTTCACGGCCGGACACGGCAGCCTCTATGCCAACGACGGTCGTACC CGCTCCGACAGCACGCAGAAATATGGCAGCGGCGGTCTGGTGCAGGGCAAGCGCTACATGATCTCGGCGACCTGGAATGCACCACGGCAGGCGTTCGACG ATCCGAGCGACTTCTTCGAAGGAAAAGGCGTGGATGCGGTGTATTTCCCCTTCCACAAGGCCAACCAGTTCCTCGGCATGTCCGGCCTGCCGACGTTCCT CGCGGTGGATGTGATGAAGCGCCCGGACGTCCCGGCTACCGTCGCTGCCTACCAGGCGCACCTGGACAGGGTGTTCGGGCGCGCCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTCGACGGCGGGCCTCGTGTCGCTTCGCTGGATGGAGTGGCGGGTCGAAATCCAGGCTCTCGGGACGAGGCCTAATGGTCACGGATCCGCTATCCGGGC TTTTCTCGGCCACGACCCGCGAGTGATCCGAAATTCGATTTTTCCATCGATCCGTCGAATTAGATTTCATCGGGGACGGGCAGGAAAGGATGCTTTGCAC GAATATTCGAATGGGCGCATCGTAAAATGAGCGCGCTTTCGACCGTGTCGAAGCCACCCCCGACAACGTTGCCGGCAGGTCGCTCATCGACTTCCGACGC CTGCCGCCGAATTCAGGAGATTCACATGTGTCCTTGCCCTCACTCCCAGGCCCAGGGAGAAACGGACGGAGAGGCTGAGTGGCATAACGCCGCCCTGGAC TTCACCCATGCGATGAGCTACGGCGATTACCTGAAGCTGGACAAGGTCCTGGACGCCCAGTTCCCGCTTTCGCCCGACCACAACGAAATGCTGTTCATCA
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Amino Acid Sequence |
>NADPH quinone reductase MdaB
MKNILLLNGGKRFAHSDGRLNQTLHETALAHLDRRGFDLRQTFIDGGYDIPTEVDKFLWADVVIYQMPGWWMGAPWTVKRYIDEVFTAGHGSLYANDGRT RSDSTQKYGSGGLVQGKRYMISATWNAPRQAFDDPSDFFEGKGVDAVYFPFHKANQFLGMSGLPTFLAVDVMKRPDVPATVAAYQAHLDRVFGRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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