Pseudomonas aeruginosa PAO579, A161_11435
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO579 Contig01, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGGGCCCCTCACAGTTTATGAATCAAAGACTTTGGCCCCAACTGGGTGCCGAATGTGAAGGTGCTTGGTTAACAGACGATCGGGGCACAGAGCTAGCAT TCGGTGGGGTGAACCTTTGCCTAAGAGACTTTGCACGCATTGGTCTATTATTTCTTCATGGCGGTCGCAGCCTGACTGGAAGTCAAATTGTAAGTGCTGA GTGGGTCAAGGCATCAACCAAACCTCGGAGTGCTCACTTGCGTCCTGGACGTTACATAGAGGATGGTGAGCCAAATCTTGGGTATGGTTACCAGTGGTGG ATTCCAGAAGGCAAAGAAGGGGAGTTCTTGGCTATCGGAGTGTACGGGCAGTTTATTTATGTAAATCCACTTAGGCGTGTGGTGATTGCAAAGACCTCCG CGTATGTCGACTACAACGTTGACGGCATCCGTATGGAGCATGAGGCACTTGCAGCGTTCAGGGCTATATCAAGAACAGTAGGGGTGAGGTGAATATAGAC
|
|
| DNA Sequence for Gene |
>A161_11435
ATGGTGACCGAACACATATTTGATTTTGAATGGCGCCCTCTGCAGAACTATCTTCGTGATCGTGATATCGCAATACCACCCTTTGCGGCAGAACAAGAGT CAAGAAGTGACGCACTTTACAACTGGATAGTCAGCAAGGGGTATTCAGGAAAAGAAGGACTGAATCTTGGAACTTATTACCATATATCTGATTATGGCGT GATAGGATTGGCGTTGCTATGCGCCGAGAACGTAGGTGATATTTTGAAAGTCATCAGGGCCTATGTCAAGTTGTTCAATCGTGATATAGCTAATGTTGGC GTCAAGCCTAGGGAGAATTACGAAGTAGAAATCCATATTTCAGTTAACTTTAAGCCAGAGTGGAATGACGCATCCCGTCAGTTTCATGTAAATGTTATAG CCTCTGCAACCTACAAGCTCATTATGGATCTGTTAGGTAATGACTTTCCCATCTCTGCATTGACAGTGCCTGTGCACGGCGCAGATAAAACAATATATGA AGGTTTCTTTTCTTTGCCTGTGAAGCATGAAGGAAATGACATAATATTTAGCTTTCCAGCTCATCAGTTGAATAGAACACTGGCGACTGCCAATCCGGCG GTATTTCAGTCGGCCCTGACTATGGCAGGTGAGAGTTTCAATGCTCTGTTGGAAGTAGAGATGGGAGGGCTCCGTCAGCGAATCGAGTTATTCCTTGATT CCATACCAGATCAATACCCTAGCTTGGTGACTACCGCAAAGTATTTACGCATGAATGAGCGGACGGTAAGACGTCGCTTGGCGGACGAGGGCTGCACTTA TCGCCAGATTGTAGATAAGGCCCGCAAAGAACGAGCAATTGCACTGCTACTGAATTCATCGATACCAGTTGATCGTATTAGCGATATTCTGGGGTACTCG GAAACAGCGAGTTTTAGACATGCATTCAGACGTTGGACCGGGCAGTCTACTACAGAATTCAGAAACAGTTTCCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCTATCTAGTTTGAGATTGGGCAAGGAGCATCTTATGAATTTCAATAATCGTAATAATCAGATTCTGTCTATGATTGCCGAGACTCAGTTCGATGCTTAC GTTTTGGGCTATATTGCGAAGGCGCGGACAATCTCGATTGCTGATGATTCCCTTCGCATTGAGGCCGAAGGATCAGCAATGCTTGCTGGACTAATTAGCG ACTCATGCAGGAAGCGTCGAACTCAAAAGAATCCATTTCCATATTTGCTACTTCAGATCGCGCACGAAGCCTTGGATCGAATCAGGCTTAATCTCGCAAA TATTCGTAATATATCTAGCGCTGATGCATTGTATAAAGAGCTGCTTAGTCAGGCTGCGTGGGACGCATCTGTTGCTATGGATAATATATCGGAATTTGTC GAGCCAGATCAGGGTGGCGTCAGAGTAATCGAGCGACTTGTCGAGTTTGCACATAATTCGGGTATTGCAGAAGGTCAAAACCTGGCGCTGGAAGCTCTTG
|
|
| Amino Acid Sequence |
>transcriptional regulator
MVTEHIFDFEWRPLQNYLRDRDIAIPPFAAEQESRSDALYNWIVSKGYSGKEGLNLGTYYHISDYGVIGLALLCAENVGDILKVIRAYVKLFNRDIANVG VKPRENYEVEIHISVNFKPEWNDASRQFHVNVIASATYKLIMDLLGNDFPISALTVPVHGADKTIYEGFFSLPVKHEGNDIIFSFPAHQLNRTLATANPA VFQSALTMAGESFNALLEVEMGGLRQRIELFLDSIPDQYPSLVTTAKYLRMNERTVRRRLADEGCTYRQIVDKARKERAIALLLNSSIPVDRISDILGYS ETASFRHAFRRWTGQSTTEFRNSFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|