Pseudomonas aeruginosa MRW44.1, A542_RS0125980
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05936 | Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE | IPR010263 | Type VI secretion system TssK | 7 | 373 | 2.0E-33 |
| PANTHER | PTHR35566 | BLR3599 PROTEIN | IPR010263 | Type VI secretion system TssK | 1 | 426 | 4.7E-101 |
| NCBIfam | TIGR03353 | JCVI: type VI secretion system baseplate subunit TssK | IPR010263 | Type VI secretion system TssK | 1 | 397 | 4.2E-55 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.