Strain | Pseudomonas aeruginosa MRW44.1 contig00013, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCCAGTTCGTGCAGCGGTTGGTCGCTTTCCGCTTCCAGTTCGAACCAGCGGGAGGCATCGTTGAAGACCTTCAGCGGGCGCATGCGTCCACGCGCGACG CCGGCCTTCTGGTAGAGGTCCTGCTGTTCCATGTAGAACAGCGACCAGCCGCGGGCCTGGGCAGCCAGCAGCATGGCGAGCGAGCTGTCCTTCTTGAAGT TGATGCGCGCGATGGGGTCCATGACGATCCCGAGGCGTACGCTCATGGGAATTCCTCCGAAAGGGGGTGGGTTGTCCGGTCGCGGCGGGGAGGCCGCGTG GCAAGCGGGTTTGACGCTCAGGTTGGCGCCCCGTTTGCGCTTGGTCAAGGAAAAAGCCGGCCTGTTCCGGGCATTATGGATAGAGTTGCGTCGAGTGTGC TAAAAAGGCTCGCGATTGGGTCGCAGCCCGTCGGTGACAGGGCGTTAGCGCACTGAAGAAAACACAGAAGAATGATTCACCGAGTCGATATAGGGCGAAC
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DNA Sequence for Gene |
>A542_RS0123015
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCTGAAAAAGGTCGGTTGCGACG TGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTA TCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAGTCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGC ATCGTCGGCTCCGACCAGTACCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG TTTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TATCCGGCCGCATGGCCGTTGATGCTTATTTCGTGATGGGGATCCCATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACC GCCATGCTGGAAAAGCATGGTCACCAGGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGG ACATCGTCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATCGTCACCACCAAGGA CCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGACGAAGAGACCCTGCTGAAAACCATCAATGCGGTG CTGGCGGGCTGAGCCCGTCGCAGCGCATCGCTCACCCTGACCCCGGAAAGACCAGGCCCCGCATGTCGGACGTTCAGACCCCCTTCCAGCTCCTCGTCGA
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Amino Acid Sequence |
>pilus response regulator PilG
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGR IVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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