Pseudomonas aeruginosa PADK2_CF510, CF510_24054
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PADK2_CF510 contig061, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCCGCGCCCTGAAGATAGGTGCTGCCGGCTATGCCACCAAGGCAGCGATCCGGCATTGCTGCTCACCGCGATCCGCAGGGTCGCCGGCGGCGGACGCT ACATCGACCCGGACCTTGCCGATCGGATGGTCTTCGAGGTTGGCCTGACCGATTCGCGTCCGCCCCATGCGCTGCTCTCCGAGCGCGAGTTCTCGGTGTT CGAGCGGCTGGTGCAGGGCGCCAACGTCAACGAGATCGCCCAGCAACTGGCGGTCAGCAACAAGACCATCAGTACCCACAAGGCACGCCTGATGCAGAAG CTCAACGCGCATTCGGTAGCCGACCTGGTGCGCTACGCGATGGAGCACCGCCTGCTCTGACAGGGGCGTTCGCCCAGGTTTTGCTCGCGGCTTGTGCGCC AGGTCCGGTTTTCGCGATCTGCTGTCTACCTGGCTTCCGCGCGGCAGGGAATGATGCTTGCCGGCCAACACGATAAGGAGAAGAAACGATGTTGCCAGCC
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| DNA Sequence for Gene |
>CF510_24054
ATGAGGACGGGCCTGTTGTGCGCCCTTCTCGGAGTTACCGCGCCCGCCTGGGCGGAATACGTGACCGTGATTTCCTTCGGCGGCGCCAACAAGGAAGCCC AGGAAACCGCGTTCTACAAACCCTTCAAGAGCGCCACCGGCAATCGCGTGGTGCATGGCTCCTACAATGGCGACCTGGCCAAGCTCAAGCGCATGGTGGA GATCAGCCACGTCTCCTGGGACGTGGTGGAAGTCGAGGCGCCGGAGCTGGCGCGCGGTTGCGAGGAAGGTCTGTTCGAGAAGCTGGACATGGCGAAGGTC GGCGATCCCGCGGATTTCGTTCCCGGCGCGGTGCAGCCCTGCGGAGTCGGCATCTTCGTCTGGACCACGCTGCTTGCCTACAACCCCGGCAAGGTTGCGG GCAGCCCGCAGGGCTGGGCGGATTTCTGGGACGTGAAGAAGTTTCCCGGCAAGCGCGGCCTGCGCTGGGGCGCCAAGTACAGCCTGGAGTTCGCCCTGAT GGCCGATGGCGTGGCGCCGAAGGACGTCTACCAGACGCTGGCGACGCCCGCCGGCGTCGAGCGGGCATTCCGCAAGCTCGACGAGCTGAAGCCCTATATC CATTGGTGGAAGTCCGGGCAGGACCCTGTGCGCGACCTGGCCGATGGCACGGTGGTGATGAGTTCGGCCTACAACGGGCGGATCGCCGCGGCGCAGGCCG AGAAGCAGCGCCTGGCAATGGTCTGGAGCGGCGGCGTCTACGATTTCGACTTCTGGGCGCTGCCGGTCGGGGTTTGGAAGAAGCAGTTGGCCGAGGAGTT CATCCGTTTCGCCAGCCAGCCGGAGCAGCAGAAGGCTTTCGCCGAGAACATCGCCTACGGCCCGGCCAACCGCAAGGCGGTAGGCCTGCTCGATCCGCAA GTGGCTGCCAACCTGCCGACCGCGCCGCAGAACATGCAGAACGCGGTGGGTATGAACGTGGCCTTCTGGGCGGAGCACGGCGAGGCCCTGGAGCAGCGTT TCCAGAACTGGGCCAAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGGCCGTTGCGCGCCAGCCGGAGAGCGCTGGCGCGCAAACCTTTGCTCTTCTCGAAAGCTCCTTCCCAGAGCGGTTCGGCCCATTCCGGGATGCATCT TTTTTGTAGGGCGATTCCTACAAAGAGCTTTCCTTTCCCCTGATAGAAAACTCTCTTGCCGGCCGATTTGCGTCCTGCGCCGGGTTCTCTAGGCTGTTCG CACAGCATCCATAAAACGAACAAAGGTGCGGTTATGGCCGAGACTCAAGGCGGCGATGTGCTGGTCAGCTTCCGTGGCGTGCAGAAAAGCTACGACGGCG AGACCCTCATCGTGAAGGATCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCCTGCTCGGCCCCTCCGGGTCCGGCAAGACCACCAGCCTGATGAT GCTGGCCGGTTTCGAAACCCCCACCGCCGGCGAAATCCTCCTGGCCGGTCGCTCGATCAACAATGTCCCTCCGCACAAGCGCGACATCGGCATGGTGTTC
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| Amino Acid Sequence |
>spermidine/putrescine ABC transporter substrate-binding protein
MRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKV GDPADFVPGAVQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYI HWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMVWSGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQ VAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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