Strain | Pseudomonas aeruginosa PADK2_CF510 contig061, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCATCAGCGGATAGACCAGGCCCAGGTCGCCGACCTTGTAGGCCTCGATCAACAGTACCCGGTAGAGCAGTTGCAGGACGGTGGCGCCGAGCAGCCAGG GCCAGACTTCGGCCGGCGGCAGGCTGACGAAGGGCAACAGCAGGATGGCGCAGAGCACGCCGACCACGTCCATGCAGGCGACCACCAGCAAGCGGTCGCT GCTGAACTTGACCAGGGTGTTCCAGGTGGCGTGGAGAACGGCGGCGCATAGCACCAGGCTGGTGGCTAGCATGACGGGCCTTATTGGTATAGACCAGGAT AGTCTATCCCGGCGGAGGCTCCAAATGCTCGCCTCGTTGCGGCGTTTTTCCCTGAAAGCTCCTACGAAAGCGGAGAAACATGCAGCAGACATCGTTACGT CAAACGGCTTAATCTTCGGACAATCCTGATGGACTACCATCGGCCAGCGCCGCACAGTGCCGGCCCGGCCTCCCTTATCAACGACACAGGAATCCCTGCC
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DNA Sequence for Gene |
>CF510_23729
TTGAGCGCTCTCCTCAAGCCCCTCGACAACCGCTTGTTCTGGCCCGCGGTCGCCATCGGCGGCCTGCTGATCCTCGCTTTCGTCCTCTACCTCCAGCACG TGCGCGGCTTCGCGCCCTGCTCGCTGTGCATCTTCATTCGCCTGGACGTGCTCGGCCTGGTGCTCGCCGGGATCGTCGGCAGCCTCGCCCCGCGTTCGCG GATCGCCGGCGGCATCGCCGCGCTGGGCATGCTCGCCGCCAGCCTGGGCGGGATCTACCACGCCTGGTCGCTGGTCGCGGAAGAGAAACTGGCTGCCCAG GGCATGGGCAGTTGCAAGATGTTCATGGGCTTCCCCGAATGGATACCGCTGGACACCTGGCTGCCGCAGGTCTTCCAGCCCGAGGGGCTGTGCGGCGAAG TGGTCTGGACCCTGCTCGGCCAGTCCATGGCGGTCTGGTCGCTGGCGCTGTTCGTGTTCTGCCTGCTGGCCCTGGCGGCCAAGCTGGCGTTCGGCCGCCG CACCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGCGCCGATATCCGTGCCGGCACAAGGAACGTGCTGGCCATTGGCTGGTCTACAATCGAGCTTTCTCAACCCGGATGAGTACCACCATGCCTCGATTCC TCAGAAATGCCCTCCTTCCCGTCCTCGCCCTGCTGCTCAGCGGCTGCGGCTACAACGCCATGCAGGCCGGCGACGAACAGGTGAAAGCCGCCTGGTCGGA AGTGCTCAACCAGTACCAGCGGCGCGCCGACCTGGTGCCCAACCTGGTCAGCACGGTGAAGGGCTATGCCTCCCATGAGGCGTCGGTCCTGACCCAGGTC ACCGAGGCCCGGGCCAAGGTCGGCAGCGTGCAGCTGAACGCCGACCAACTGGACGACGAGCAGGCCGTGCAGCGCTTCCAAAAGGCCCAGGGCGAACTGA GCTCGGCGCTTTCGCGCCTGCTGGTAGTCACCGAGAACTACCCGCAACTGAAGGCCGACGGCCTGTTCAAGGACCTGCTGACCCAACTGGAAGGCACCGA
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Amino Acid Sequence |
>dihydrolipoamide dehydrogenase
MSALLKPLDNRLFWPAVAIGGLLILAFVLYLQHVRGFAPCSLCIFIRLDVLGLVLAGIVGSLAPRSRIAGGIAALGMLAASLGGIYHAWSLVAEEKLAAQ GMGSCKMFMGFPEWIPLDTWLPQVFQPEGLCGEVVWTLLGQSMAVWSLALFVFCLLALAAKLAFGRRTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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