Pseudomonas aeruginosa PADK2_CF510, CF510_23619
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PADK2_CF510 contig061, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCCAGCCAAACCGACTGCACTACCTGTCCGCTGAAAGCGAAATGCTGCCCCAACACGCCGAATCGGAAGATCGTCCGCAGTATCCATGAGGCTGCCCGC GATGTGGCCAGGCGCATCGCCAAGACACCGGAATACCTCGTCTCTCGCTGCGAACGAAAGAAGGTGGAGATGCTGTTCGCCCACCTCAAACGGATCATGA AACTCGATCGTTTACGACTGCGCGGCCTGACAGGTGCCACTGACGAATTCACTTTGGCGGCGGCGGTGCAGAACCTGCGACGCATGGCCAAGCTTTTGCC TCAAGGGCCACCGCTCACGGGATAGGTACGCCTGCTGAGAGCAGAAACCTTCAAATTAACCCTCAGGCCTGAGCAAGGACGCTCAGCGAAACGCCGAAAG GCAACCTGAAGTGGCTTGCAGTCACTTCGACAGCAGGCACACCTGATCGGCAGGCCGCCGCTAAACCTACTTTTTCAACAGAATCGGCCGCTACCTGCTG
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| DNA Sequence for Gene |
>CF510_23619
GTGATCGGCCGCGACGCGCGGATCGACATGATCGACCTGTGGGCCAAGGAGCCGACCAAGGTCGCCGAGATCAAGATCGGCATCGAGGCGCGCTCGGTGG AAAGCTCCAAGTTCAAGGGCTACGAGGACCGCTACACCATCGCCGGCGCCTACTGGCCGCCGCAGTTCGCGATCATGGACGGCGAGACCCTGGAGCCGAA GCAGATCGTCTCCACCCGCGGCATGACCGTAGACACCCAGACCTACCACCCGGAACCGCGCGTGGCGGCGATCATCGCCTCCCACGAGCACCCCGAGTTC ATCGTCAACGTGAAGGAGACCGGCAAGGTCCTGCTGGTCAACTACAAGGATATCGACAACCTCACCGTCACCAGCATCGGTGCGGCGCCGTTCCTCCACG ACGGCGGCTGGGACAGCAGCCACCGCTACTTCATGACCGCCGCCAACAACTCCAACAAGGTTGCCGTGATCGACTCCAAGGACCGTCGCCTGTCGGCCCT GGTCGACGTCGGCAAGACCCCGCACCCGGGGCGTGGCGCCAACTTCGTGCATCCCAAGTACGGCCCGGTGTGGAGCACCAGCCACCTGGGCGACGGCAGC ATCTCGCTGATCGGCACCGATCCGAAGAACCATCCGCAGTACGCCTGGAAGAAAGTCGCCGAACTACAGGGCCAGGGCGGCGGCTCGCTGTTCATCAAGA CCCATCCGAAGTCCTCGCACCTCTACGTCGACACCACCTTCAACCCCGACGCCAGGATCAGCCAGAGCGTCGCGGTGTTCGACCTGAAGAACCTCGACGC CAAGTACCAGGTGCTGCCGATCGCCGAATGGGCCGATCTCGGCGAAGGCGCCAAGCGGGTGGTGCAGCCCGAGTACAACAAGCGCGGCGATGAAGTCTGG TTCTCGGTGTGGAACGGCAAGAACGACAGCTCCGCGCTGGTGGTGGTGGACGACAAGACCCTGAAGCTCAAGGCCGTGGTCAAGGACCCGCGGCTGATCA CCCCGACCGGCAAGTTCAACGTCTACAACACCCAGCACGACGTGTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCCGCGTGCGGGGCACGCCCCGCACGCTCCCCCCTACGAGGAACCGTGATGAAACCGTACGCACTGCTTTCGCTGCTCGCCACCGGCACCCTGCTCGC CCAGGGCGCCTGGGCCGAAGACCCCGAAGTGCTGTTCAAGAACAAGGGCTGCGTGGCCTGCCATGCCATCGACACCAAGATGGTCGGCCCGGCCTACAAG GACGTCGCCGCCAAGTTCGCCGGCCAGGCCGGCGCCGAAGCGGAACTCGCGCAGCGGATCAAGAACGGCAGCCAGGGCGTCTGGGGCCCGATCCCGATGC CGCCGAACGCGGTCAGCGACGACGAGGCGCAGACCCTGGCGAAGTGGGTCCTGTCGCAGAAATGAACGCCCCTCCGGACTTCCGGCGCGCCGCCAGCCAC GCCTTGTGGCTGGCCCTCGCGCTGACGTTCGCCTGTCCTCTTCCGGGCCTGGCCGACGAGCATCCCGATGCCCGTCGCCAGGCCCAGTTGCGTCACCTGC
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| Amino Acid Sequence |
>nitrite reductase
MIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGS ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW FSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKFNVYNTQHDVY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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