Strain | Pseudomonas aeruginosa PADK2_CF510 contig019, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGACCCGCTTTTTCCTGTGTCATCCGGCGCCCCCGCGCCCACTCGATTTCAGCAAGGAGTTCCCATGACCAAGACCGTTATCCACACCGACAACGCCCC GGCCGCCATCGGCACCTACTCCCAGGCCATCAAGGCCGGCAATACCGTCTACGTGTCCGGGCAGATCCCGCTGGACCCGAAGACCATGGAACTGGTGGAA GGCTTCGAGGAGCAGACCGTCCAGGTGTTCGAGAACCTCAAGGCGGTGATCGAGGCTTCCGGCGGCTACCTGCACGACGTCGCCAAGCTGAACATCTTCC TCACCGACCTGTCGCACTTCGCCAAGGTCAACGAGATCATGGGCCGCTACTTCACCCAGCCCTACCCGGCGCGCGCCGCTATCGGCGTAGCCGCCCTGCC GAAGGGCGCACAGGTGGAAATGGACGCCATCGTCGTCCTCGAGTAAGCCGGATGTTCGCGACGGGGCCCAAGGCCCCGTCGCTCTGCATGGAGTAGCACG
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DNA Sequence for Gene |
>CF510_13719
ATGCGCCGCGTGATTTTCCTCGCCGCAGCCGCCACCCTGCTGGCCGGCTGCGCCGGCACGGCCGATCCGTCCGGCACCTGGATCAACCAGGCCGCGATCG ACGCCGCGAGCAAGGACGGCAAGCTGCGCGAGGCCCTGCTCGCCTATGGCCCGAACCTGGAATGGAAGCTCGACAGCAAGGCAGGCGAAGCCACCTTCAG CAACGGCTTCGAACTGGGCGAAGGGACCCTGAGCAAGAGCGATGACGAGCACTGGAAGGTTGCCTTCTATGGCGACGACAACCAGGAGAGTCTCGAACTG GACGGCAAGGAGCTGATCCAGCAGGCCAGCGCCAACGGCCCGGAACAGCGTTTCCGCCGTCTCGACCCGCAACCCGCGGCCAACAGCCCTGCCGGCAGCG GTTTCGAGCGGGCCTTGTATGGCAGCTATCTGAAGGGCAGCTGGAAGATCCGCGAAGGCCAGGGCCAGGGCGGCAAGGTCGAGTTCCAGGCCAATGGCCT GGTCAGCGGTCTGCCCGGCGCCGAACGCTACGCGCTGTGCCTGGCCGGCGATTGCGCAGCGATGAGCGGCGACAACGACAGCATCTGGCTGCAACAAGGC AACCGCGGCCGCGAATTGCTGTTCAGCCTCGACGACGACGAGCTGCAACTGTTCGAAGCGGTCAATACCGCCGGCGCCAACGAGATGCCCAGCTACGTGC CCGGCAAGCGCGTCTGGCTGCTGGAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCTCTCAGAGGGCGGCCAGCACCAGCCAGCCGCCCAGCGCCAGCAGCAGGACGCCGCACAGCCGGTCCAGCGCACCTACCCTCCGTTGCAACCAGCCG CGCCAGCGCGGCCTGTCCAGCAGGCGAACCAGCGCCATGTCCCAGCACAGCACCGCCAAGCTCATCCACGCCAGGCACAAGGCCAGCGCCCAGCCCGGCA GGCTGAAGCGCGCCAGCACGCCGAACAGCCCCGCATAGAAGATCGGCAGCTTGGGATTCAGGCTGCTCGCCAGCAGGCCGTCGCGCAGCCCGCGCAGATA GCCGCCGCGGGACGGGACGTCGCGCTGCGCCGGCATTTCCAGTCGCCTCTGCGCAAGCAGCGCCTGGCCCGCCAGCCAGAGGAAGTACAGTCCGCCGAGC GCCTGCAGCCAGCGCAAGGCGCTGTGCGCCGAGTCCGGCACGCTGGCCAACAGGCCGAGCACCAGCAGCATGCTCAGGAGGTTGGCCAGGGCGATGCCGG
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Amino Acid Sequence |
>hypothetical protein
MRRVIFLAAAATLLAGCAGTADPSGTWINQAAIDAASKDGKLREALLAYGPNLEWKLDSKAGEATFSNGFELGEGTLSKSDDEHWKVAFYGDDNQESLEL DGKELIQQASANGPEQRFRRLDPQPAANSPAGSGFERALYGSYLKGSWKIREGQGQGGKVEFQANGLVSGLPGAERYALCLAGDCAAMSGDNDSIWLQQG NRGRELLFSLDDDELQLFEAVNTAGANEMPSYVPGKRVWLLER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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