Strain | Pseudomonas aeruginosa PADK2_CF510 contig009, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCTGGACCAGCGGCGCCAGCGGCGCGGCGCTGTCCTCGGCGGCGTTCGAGGCGGCGATGCCGGGCGTCGGCCACTACATCCTGTCGCTGGCCCTGGTGG TGTTCGCCTATACCACCATCCTCGGCTGGAGCTACTACGGCGAGCGCTGCTGGGAGTACCTGGCGGGCACCCGGGCGATCCTGCCGTTCCGGATCGTCTG GACCCTGGCGATTCCGTTCGGCGCCATGACCCAGCTGGACTTCGCCTGGCTGGTGGCGGATACCCTCAACGCGCTGATGGCGATTCCCAACCTGATCGCC TTGCTGCTGCTGAGTCCGGTGGTGTTCCGCCTGACCCGGGAGTATTTCGCCAAGGCCAGGAGTTGAGCCTCGGGGGACGGCGACGCTCAAACCCGAGGTT TTCGCTCGGGTAAAGCGTGCTAGCATCGTCGCCGGCCCCGAATGCTTCCGCCGTCGGCCACAGGGCCGGCGGCTTCTCACTGACTAGAAGGATCAACGCA
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DNA Sequence for Gene |
>CF510_10732
|tpx
ATGGCTCAAGTGACTCTCAAGGGCAACCCGGTCAACGTCGATGGCCAGCTCCCGCAGAAAGGCGCCCAGGCTCCGGCCTTCAGCCTGGTCGGCGGCGACC TCGCCGACGTGACCCTGGAAAACTTCGCCGGCAAGCGCAAGGTGCTGAACATCTTCCCCAGCGTCGACACCCCGACCTGCGCCACCTCGGTGCGCAAGTT CAACGTCGAGGCCGGCAAGCTGGCCAACACCGTGGTGCTGTGCATCTCCGCCGACCTGCCGTTCGCGCAGAAGCGCTTCTGCGGCGCCGAAGGCCTGGAG AACGTAGTCAACCTGTCGACCCTGCGCGGTCGCGAGTTCCTCGAGAACTATGGCGTGGCCATCGCCAGCGGCCCGCTGGCCGGCCTGGCCGCGCGCGCCG TGGTGGTGCTCGACGAGCAGAACAAGGTGCTGCACAGCGAACTGGTCGGCGAAATCGCCGACGAGCCGAACTACGCGGCGGCCCTGGCGGCTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCCACGGCCAACCCGCTTCGTCCCATGACTGTCAGCCAGGCTGGCTGGTAACGGGCGAACCCGAATCCCTTGGCTGCTCGCTTCGGGCCATGAGCAGG GCGGATAATCGCGGCGCGGTCATCCGCCCTGCGTCGCAGAGACGCAGCGCTAGCGCATGGCGACCTGGTGGCGCCGGCTGACGCTGGCGAAGGCGCTCCG GAACGCCTGCATCTCTTCCTCGCTGCCTACCGTCACGCGGACCCAGTTGGGCCAGGAGGCCCACGGGCGGCCAACGTGCACCCGCTGTTTCTCCAGTTCG GCGATGACCAGCTCGGCGGGACGGCGCATATCCACCATGAAACAGTTGGACTGCGAGGCGGTGCAGCGGAAGCCCTGCTGGCGCAGCCAGGCGATGGTGC GCTCGCGGACCTCTGCGTTCTGCTGCTTGCGCCGTGGCACCAGATCGTCGTCACGCAGGCTTTCCAGCCCGGCGTGGGCGGTCGGCGAGGGCACCACGTT
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Amino Acid Sequence |
>lipid hydroperoxide peroxidase
MAQVTLKGNPVNVDGQLPQKGAQAPAFSLVGGDLADVTLENFAGKRKVLNIFPSVDTPTCATSVRKFNVEAGKLANTVVLCISADLPFAQKRFCGAEGLE NVVNLSTLRGREFLENYGVAIASGPLAGLAARAVVVLDEQNKVLHSELVGEIADEPNYAAALAAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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