Pseudomonas aeruginosa 19BR, IAI_RS0125350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0043190 ATP-binding cassette (ABC) transporter complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002741
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF002741 MppA IPR030678 Peptide/nickel binding protein, MppA-type 16 530 3.4E-104
FunFam G3DSA:3.10.105.10:FF:000002 Dipeptide ABC transporter, substrate-binding protein - - 287 505 1.6E-100
CDD cd08493 PBP2_DppA_like - - 25 514 0.0
Gene3D G3DSA:3.10.105.10 - - - 287 505 0.0
Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IPR000914 Solute-binding protein family 5 domain 68 448 9.0E-96
FunFam G3DSA:3.40.190.10:FF:000036 Dipeptide ABC transporter, substrate-binding protein - - 206 312 1.9E-29
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 25 528 0.0
Gene3D G3DSA:3.40.190.10 - - - 206 518 0.0
FunFam G3DSA:3.90.76.10:FF:000002 Dipeptide ABC transporter, substrate-binding protein - - 45 205 9.5E-77
PANTHER PTHR30290 PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER IPR039424 Solute-binding protein family 5 38 528 8.3E-113
Gene3D G3DSA:3.90.76.10 - - - 47 205 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.