Strain | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAACAGGCGCTACCTGGCGACCAAGGCCGGCAAGCTCGGGCACATGCTCGGCAGCCTGCACCAGGGCGAGGCGGAAACCACGTGAGTCGCCAGCAAGCCC GCGGCGCGCTGGGACGTGCCTGGTGGTTGCAACTGGCGTTGGCGCTGTTGCCGCTGATCCTGGTCGAGTTCTTCCTCGGCGAACTGCAACCCCTTTCCCA TGGCCTGGCGATGCCGCTGTTCATCGCCGCGCTGCTGTCGATGTTCGTCAACCTGCCGCTGTTCGGTGCCTACAAGCGTGGTCTCATCGCCACCCAGAAA GCGCTGGATACGGCGGAGGAAGCCGCCGCCTGGGCCCGTCTGGCGCAGGTGCGCCGCAAGGCCCTGTTCGGCGCCAGCCTGCCGGCCTGGATCGGCGTGC CGGGTGTGTTCGCCGGGCTCAACGGCGTTGCGCTGATCCTGCTCGGGGTCACCAGCCTGGTGCTGTTCTGGCTCTACCGTATTCCGCGTCAACTCGGTTG
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DNA Sequence for Gene |
>IAI_RS0122995
ATGCGCTCGTTCTGGCTGCTCGCCTGCCTGCTCCTCAGCCTTTCCGCCGGGGCGGCGCAGCGGGTGGTCAGCCTGGCGCCTTCGCTGACCGACAGCGTCC TCGAACTCGGCGCAGCGCGCCGCCTGGTCGGCGTGCTGGATGGCGGCGAGCGTCCGGCGGCGATTGGCGACCTGCCTTCCGTCGGCCGCTACGGCCAGGT CAATCTCGAACGCCTGCTGGAACTGCAGCCCGACCTGATCCTGGTCTGGCCCGGCAGCGTGCCCGAGGCGCAGTTGCAGCGCCTGCGGGACTTCGGCATC GCCCTCTTCATCGCCGAACCGCACAGCCTCGACGAACTGGCCCTGCAACTGGCTGCGCTGGGCGAGGCATTGGGCGAGGCCGAGGCCGGCCAGCGGTTGT CGGCCAGGTTCCGCGAAGGCATGCGGCGCCTGGCCGAGCGCTACCGGCGGGACAAGCCGCTGAAAGTGTTCTACCAGGTCTGGGACCGGCCGCTGTACAC CATTGGCGGACGCCAGGTGATCAGCGATGCGCTGCGCGTCTGCGGCGCCGAGAACCTATTCGGCGACCTGCCGCAGCCGGCGCCGCAGGTCAGCGTCGAG GCGGTTCTGGCGCGCGATCCGGCGGCCATCGTCGCCGGCAGTCACGCCCAGCTCGAACTCTGGCGGCAATGGCCGGCGCTGGCGGCGACGCGGCGCGGAC AGCTGTACCGGATCGAAGACAAGAACCTCGAGCGGCCGAGCTTCGCCATGCTGGCGGCGACCGAGAAACTCTGCCGCTCGCTCGCCGGGGCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGCTTGCCGGTATCGCGCGCTGTATCGGCGGATAACGCCGGCGGCGTTGTTCGCCCTACGGCAATTGGGGGGGAGGGCGAATAACCGCAACGCGGTTAT CGCTGCCAGTCGGCGGGGCATGTCGGTATGGTGGTGTATCGGCGGATAACGCCGGTGGCGTTATTCGCCCTACGGCAATTGGGGGGTAGGGCGAATAACC GCAACGCGGTTATCCGCCGTTGTCGCTGGGTTTGGCGCTACTGCCGGTCGAGACGCTGGCGTACTGCCTTTTCGATGCCCGCGGCATCCAGGCCGCATTC GGCGAGCATCTCGCTGGGCTTGGCGTGTTCGACGTAGTAGTCGGGCAGGCCCAGTTGCAGCAGCGGGACTTCGAGGCCCTCGCTGGCGAGGAACTCGCCG ACCGCCGAGCCGGCGCCGCCCATCACGGCGTTTTCCTCGATGGTCACCAGCAGTTCGTGGCTGCCCGCCAATTCGCGTACCAGGGCTTCGTCGAGGGGTT
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Amino Acid Sequence |
>iron-hydroxamate ABC transporter substrate-binding protein
MRSFWLLACLLLSLSAGAAQRVVSLAPSLTDSVLELGAARRLVGVLDGGERPAAIGDLPSVGRYGQVNLERLLELQPDLILVWPGSVPEAQLQRLRDFGI ALFIAEPHSLDELALQLAALGEALGEAEAGQRLSARFREGMRRLAERYRRDKPLKVFYQVWDRPLYTIGGRQVISDALRVCGAENLFGDLPQPAPQVSVE AVLARDPAAIVAGSHAQLELWRQWPALAATRRGQLYRIEDKNLERPSFAMLAATEKLCRSLAGAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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