Pseudomonas aeruginosa 19BR, IAI_RS0120625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCCGTCGGGCATCAGGCCCTTGCCCTGGGTGGCGCGCACGGCCTGGCAGAGGTTGGTCTTGCCGGACAGGCAGAATTTGCACTTGCCGCACTCGGCG GTGTAGAGCGGGATGACATGGTCGCCCACCTGCAGGGAGGTCACGCCCTCGCCCACCGCTTCGACGATGCCGCCACCTTCGTGGCCCAGGATGCACGGGA ACACCCCCTCGGAATCCTGGCCGGACAGGGTGTACGCGTCGGTATGGCAGACGCCGGTGGCGACGATGCGCACCAGTACCTCGCCCTTCTGCGGCGGCGC CACATCCACCTCGACGATTTCCAACGGCTTGTTGGGGGCGAAGGCGACGGCGGCACGGGACTTGATCATCTGGGAACTCCTGAACGATGGAAGCCGGCGG GCCGCTAAGCGACCCACTGAAACGGAAAGTGTAGAAAACCGCGTTTCAAGGAATAATCAGGCAATAATCAAAACATTATTGCCATACAGGGACAATCCAG
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| DNA Sequence for Gene |
>IAI_RS0120625
ATGAATCGCTGGGAAGGACTCGACGAATTCGTCGCTGTCGCCGAAACCGGGCAGTTCACCGCGGCAGCCGAACGCATGGGCGTTTCCTCGTCGCACATCA GCCGCCAGGTCGCCCGCCTGGAGGAGCGCCTGCAGACCCGCCTGCTCTACCGCAGCACCCGGCGAGTATCGCTGAGCGAAGCCGGACAGACCTTCCTGCA ACATTGCCAGCGCCTGCAGGACGCCCGCGACGAAGCCCTGCGCGCGGTCAGCGACCTCTCCGCGGAGCCCAAGGGCCTGCTGCGCATGACCTGCGCGGTA GCCTACGGCGAACGTTTCATCGTGCCGCTGGTGAATGCCTTCATGGCCGACTATCCGCAACTGCGGGTCGACATCGAGCTCTCCAACCGCCAGTTGGACC TGCTCCACGAGGGCTTCGACCTGGCCATCCGCCTCGGCCGCCTGAGCGATTCGCGATTGGTCGCCACACGGTTGGCACCACGCGTCATGTACCTCTGCGC CACCCCGGAATACCTGCGCCGCCACGGCACTCCGCAGTCGCCGGCGGAACTCGGCCAGTTCAACTGCCTGATCGGCAGCAGCGACCTGTGGAGCTTCCTT GAGGACGGCCGGGAAACCCAGCACCGGGTCCAGGGCAACTGGCGCTGCAACAGCGGCCAGGCGGTGCTCGACGCCGCCCTGCGCGGCTTCGGCCTGTGCC AGCTGCCTGACTACTATGTGATCGAGCATCTGCGCAGCGGCCGCCTGGTCTCCCTGCTGGAAGGCCACCAGCCGCCGAATACAGCGGTATGGGCGCTGTA CCCGCAGCAGCGGCACCTGTCGCCGAAAGTCAGGCAACTGGTGGACTATCTCAAGGAAGGCCTGGCGCAATCCCATCCGGGACTCGCCGGGGAGAAAAAC CTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCAGTAAGGCGATTCACCGCTGCGATAGACTTGGCGGTTTCCCGTTCCACCCGCTATCGATTCAAGGAAGTCGCATGTCTGCCTTCAATGCGTTTCGCC AACGCTACCTGGTGAGGTTCTGGTCGCCGCTGCCGGCGCTGGTCGCCCTCGGCGTCGCCTCCGCCTACTACTTCGCGCTCACCGGCACCTTCTGGGCGGT GACCGGCGAATTCACCCGCTGGGGCGGCCACGTGCTGTCCTGGTTCGGCTACCAGCCACAGGACTGGAGCTACTTCAGGCTGATCGGCCTTCAAGGCACG CCGCTGGACCGGATCGACGGAGTGATGATCATCGGCATGTTCCTCGGCGCCCTGTGCTGCGCCCTCTGGGCCGGCAACGTCAGCCTGCGCTGGCCGACCA GCAAACGTCGCCTGCTGCAGGGTCTGGTCGGCGGTATCGTCGCCGGCTTCGGCGCGCGCCTGGCGATGGGCTGCAACCTGGCGGCGTTCTTCACCGGTAT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MNRWEGLDEFVAVAETGQFTAAAERMGVSSSHISRQVARLEERLQTRLLYRSTRRVSLSEAGQTFLQHCQRLQDARDEALRAVSDLSAEPKGLLRMTCAV AYGERFIVPLVNAFMADYPQLRVDIELSNRQLDLLHEGFDLAIRLGRLSDSRLVATRLAPRVMYLCATPEYLRRHGTPQSPAELGQFNCLIGSSDLWSFL EDGRETQHRVQGNWRCNSGQAVLDAALRGFGLCQLPDYYVIEHLRSGRLVSLLEGHQPPNTAVWALYPQQRHLSPKVRQLVDYLKEGLAQSHPGLAGEKN LR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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