Pseudomonas aeruginosa 19BR, IAI_RS0115355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details]
DNA Sequence Upstream of Gene
CGCGGCGCAGCGACTCCAGCAGCGCCAGGCCGTCGAGGCCGGGTAGCATGATGTCCAGCAACACCAGGTCGAACGCTTCGCGCCCGGCGGCTTCCAGTCC GTGCGAGCCATCGCCGCAGACGGTTACGCGGAAGCCGCGCCGGCGGAAATGCGCGTCGAGATCCTCGCGTAGGCTCGGGTCGTCTTCGACCAGCAGCAGG CGGGGAGATGGGATTGAAATATGAGAATGATTCACGTTCGTGAATATCTCATTTTTGCCGGGTATCGGGCAATGGGCCAATGCGCCGCAGCGTGCTCGGA GCGGAAATACTTTTCGACAAAGCCGTCGTTGCTTCGGCTTTGGTTCTGGCTTAGGGTCGGCGGGTCCGCAGGAGGCGGGCAGGAGTGTCGTGGCTATTGG CCAGCCTTTCGCGACGGCACTGGGTTGTACGATCATCTGGCGCGCTGCTGGCGCGTTGTTCGGGCCGCCCGCCGCAGGTGACTATCAAGGAAGATTCCCC
DNA Sequence for Gene
>IAI_RS0115355
ATGCTGTTCTCCCAACACACCCGCCTGGTACACGTGGACTCCCCGCTGGGACCCGAGGTCCTGCAACTGCAACGGCTGGAGGGTCGCGAAGAGCTGGGCC GGCTGTTCAGCCACGAGCTCGAACTGGTCTCGAGCAATCCCGCCTTGCCTCTGGATGCCCTGTTGGGCAAGCCGATGAGCCTCGCGCTGGAACTCCCCGG CGGCAGCCGGCGGTATTTCCACGGCATCGTCGCGCGCTGTAGCCAGGGCGCCGGCGCCGGCCAGTTCGCCAGCTACCAGGTCACCCTGCGGCCCTGGCTG TGGCTGCTGACGCGCACCTCCGACTGCCGCATCTTCCAGAACCAGAAGGTCCCGGACATCATCAAGCAGGTGTTCCGCGACCTCGGCTTCTCCGACTTCG AGGACGCCCTGAGCCGCTCCTACCGCGAGTGGGAATACTGTGTGCAATACCGCGAGACCAGCTTCGATTTCGTCAGCCGGCTGATGGAGCAGGAAGGCAT CTACTACTGGTTCCGCCACGAAAAGAAGCGCCACATCCTGGTGCTCTCCGATGCCTACGGCGCGCACCACAGCCCGGCCGGCTACACCAGCGTGCCCTAT TACCCGCCGAGCCTCGGCCATCGCGAGCGCGACCACTTCTTCGACTGGCACATGGCGCGCGAGGTCCAGCCCGGCTCGCTGAGCCTCAACGACTACGACT TCCAGCGTCCCGGCACCCGCCTGGAAGTGCGCTCCAATGTCGGGCGCGCCCATGCCGCGGCCGACTACCCGCTCTACGACTACCCTGGCGAGTATGTGCA GAGCCAGGACGGCGAACACTATGCACGGACCCGCATCGAGGCGATCCAGACCCAGTACGAGCGAGTTCGCCTGCGGGGATGCGCCAGGGGTATCGGGGCG GGCCATCTGTTCCACCTGAGCAACTACCCGCGCCTGGACCAGAACCGCGAATACCTGGTGGTTGGCGCCGAGTACCGGGTAGTCCAGGAACTCTACGAGA CCGGTAATGGCGGGGGCGGCGCGCAGTTCGAGAGCGAGCTGGACTGTATCGACGCCGGCCAGGCTTTCCGCCCCTTGCCGTCGACCCCGGTGCCGGTGGT GCGCGGCCCGCAGACCGCGGTGGTGGTCGGGCCCAAGGGCGAGGAGATCTGGACCGACCAGTATGGCCGGGTCAAGGTGCATTTCCACTGGGACCGCCAC GACCAGTCCAACGAGAACAGCTCCTGCTGGATGCGCGTCTCGCAGGCCTGGGCCGGGAAGAACTGGGGCTCGATCCAGATCCCGCGGATCGGCCAGGAAG TGATCGTCAGCTTCCTCGAAGGAGACCCGGACCGGCCGATCATCACCGGGCGGGTCTACAACGCCGAGCAGACGGTGCCCTACGAGCTGCCGGCGAACGC TACCCAGAGCGGCACCAAGAGCCGTTCGAGCAAGGGCGGCACGCCGGCCAACTTCAACGAGATCCGCATGGAGGACAAGAAGGGCGCCGAGCAGTTGTTC ATCCATGCCGAGAGGAACCAGGACATCGAGGTCGAGAACGACGAGAGCCACTGGGTCGGCCACGACCGGACCAAGACCATCGACCACGACGAGACGGTGC ATGTGAAGCACGATCGCACCGAGACCGTGGACAACAACGAGACCATCACCGTGCATGCCAACCGCAGCAAGACGGTCGACCGCAACGAGACGGTCAGGAT CGGCATGAACAAGACGGAAACCATCCTCATGGCCTCGTTGCAGAACGTCGGCATGGGGCGCATGGAAAACGTCGGGCTCGGCTACAGCCTGAACGTCGGC ATGATGATGAACACCGTGGTCGGGCTGAACCAGAGCACCCAGGTGATGAAGAAGAAGACCTTGTCGGTGGGCGATAGCTACGAAGTGAGCGTGGGCGGCA GCGACGATGGCTCTAAGATCACCCTGGACGGTCAGAGCATCACCCTCGGCAGCCAGCGCATCGAGCTGACCGCCGACCGCGAGATCCTCTTGCGCTGCGG CCAGAGCACGATCCGCCTGACGCCGGGGGAGATCGAGATCCTCTCGCCCAATGTCGATATCAACTGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGGGCGGATGTCCTGTCGCGGCTTTTCCCAAGGAAGGATGGATAGATGAGCGGCCTACCGGTTTCCCATGTCGGCGAGAAAGTCTCGGGAGGGGTT ATCTCCACCGGCTCGCCCACCGTGCACGTCGGCAGCAGCGCGGTCGGCCTGGCCGACCGGGTGTCCGCCTGCGTGCCGTTGGTGGGCAAGCCGGTCAACC CGATGCTCGGCAGCAAGCTGCTGCCGGAAGAGGTCGATTTCGCCCTGGCGGCGCCGGACACCTTCACCTTCGCCCGTGGCTACCTGTCGAGCAACCCCCG TATCGGCCGGCTCGGCCGGGGCTGGTGGCTGCCGGGCGAGAGCATGCACCTGGAACTGAGCGAAGACGCCTGCGTGCTGGTCGACGCCCAGGGCCGCCGG ATCGGCTTTCCTGCGCTGGCTCCCGGTGCCCAGCATTATTCCGGCAGCGAGGAGCTGTGGCTGCGCCGCGGCGGTTCGAGCGGCGGCGAAGCGCAGGCCT
Amino Acid Sequence
>type VI secretion protein ImpA
MLFSQHTRLVHVDSPLGPEVLQLQRLEGREELGRLFSHELELVSSNPALPLDALLGKPMSLALELPGGSRRYFHGIVARCSQGAGAGQFASYQVTLRPWL WLLTRTSDCRIFQNQKVPDIIKQVFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIYYWFRHEKKRHILVLSDAYGAHHSPAGYTSVPY YPPSLGHRERDHFFDWHMAREVQPGSLSLNDYDFQRPGTRLEVRSNVGRAHAAADYPLYDYPGEYVQSQDGEHYARTRIEAIQTQYERVRLRGCARGIGA GHLFHLSNYPRLDQNREYLVVGAEYRVVQELYETGNGGGGAQFESELDCIDAGQAFRPLPSTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRH DQSNENSSCWMRVSQAWAGKNWGSIQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSGTKSRSSKGGTPANFNEIRMEDKKGAEQLF IHAERNQDIEVENDESHWVGHDRTKTIDHDETVHVKHDRTETVDNNETITVHANRSKTVDRNETVRIGMNKTETILMASLQNVGMGRMENVGLGYSLNVG MMMNTVVGLNQSTQVMKKKTLSVGDSYEVSVGGSDDGSKITLDGQSITLGSQRIELTADREILLRCGQSTIRLTPGEIEILSPNVDINC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site