Pseudomonas aeruginosa 19BR, IAI_RS0114860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTGGGCAGCGAGAGCCGCTTCGGTGCCGAGCAGATCGCGCTGTTCGAGCTGCTTCGCCCGTGGGTCATCGCGCTGATGAAAAAACGCATCCACTTCGAGG ATGCGGTCAGGGAGGAGGCGAAACCGATCGCAGCGGCGGAGGTGGAAGTCCAGCCCTGGAGAGGGTTGATATCGCCGCTGACCGCGCGGGAGTCGGATGT CATCCGCCTGATGCTGGATGGATACTCGAACAAGGAAATAGCGGATCGGCTGACGCTGTCGATCGCCACTATCAAGGTGCATCGCCGGCACATCTACGCG AAGCTGAACGTGAAGTCCCACTCCGAGATATTCGCGCTGTTGATCAACCCGCCCGCGCCGCGGCTCGCCGACGCACGCTAGTGCGCCGCCTGCGGAGGAA CCCGGGCGCATAAGGTTATGCGAAATTCATATTGCCCGACGCTGAAAAAGCCGGCGTCGGATTGCACTCATGGGCGAATTCCATCCAGGACGATTCGACC
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| DNA Sequence for Gene |
>IAI_RS0114860
ATGCCCGATGTACGTCTTTCCTCTCGTTCGTTGACCCCCGTGCTCTGTGCGGTGGGGCTCGCCTGCGCGCTGCAGGGCGAGGTGCAGGCCGCCGACGGTG GGCCGCGCGACGCGGCCACGGCGCCCCGGGTATTCGACATAGCGCCCGGCGAACTGGCCGAGGTGTTGTTGAACATCGTGCGCCAGGGACACGTGCCGAT CGCCTTCGACCAGCGCCTGGTGGCGGGGTTGCGCGGACCGGATATCCGCGGCCGGCTCAGTGTCGAGGACGCCTTGCGGCGTGCCCTGGCCGGCAGCGGG CTGGCATACGCGCAGGACGAAAGCGGTGCCTTCGTCCTGCGCCGCGGACAGGCGCCTGTGCAGGAGACGCGAGGTGCGGCGGTGGCACCGACCTTGTCCA CCGTGGTGGTCACCGGCACGCGCAAGAGCGATGTGAGGGCGCAGGACAGCCTGAGCCCGATCGACGTGGTCAGCGCTACCCAGCTACGTAGCAGCGGCGC GGTCGACCTGCGCGATGCACTGGTCAAACTGCTGCCCTCGCTGACCCGCCAGGCCCAGCCGTTCAACGCCTCGGCGTTGACCCACACGCAGTCGCTGCGC GGGCTGAGCCCCAACCATGTGCTGGTGCTGGTGAACGGCAAGCGTCGCCACGAAACGGCCAATCTCAATATCAGCGGGGGGCTGGAGAAGGGCTCCACCG GGGTCGATCTGGACACCATCCCGATCAACGCCATCGAGCGGGTCGAGGTGCTGCGCGACGGCGCCTCGGCGCAGTACGGTTCGGACGCCATCGCCGGGGT GATCAACGTCATCCTCAAGTCCGCCGACAGCGGCGGGTCGGCGGCCGCTGACGTCGGGCAGACCGGCGACGGCGACGGCTTCACCCATGGCGGCGGGGGG AACATCGGGCTGGCCTTCGGCGATAGCGGCTTCGTCAACCTCACCGCCGAATATCGCGAGCAGGAGCGCACGATGCGCAGCGGCATCGATGAGCGCACCG GTCGGCGCGACAATATTTCCATGGGCGATCCCGCGTTCCACCGGCAATCGTTGGCGCTCAACTCGGGTTTCGGGTTGGGCGACGATATCGAGGTGTACGG CTTCGGCACCTATACCCGGCGCAAGGCCTCCTCGGCGGCCAACTATCGCCTGGCTTCGGTGGCGCCGACGCTGTATCCGGACGGCTTCACGCCGCGCCCG AACAGCGACGAGGACGACTATGCGTTCCTCGCCGGGGTGCGCGGCGAGCGTCTGCTGGATGCCTGGCACTGGGACCTGAGCAGTGGCTACGGCGCCGACC GTCCCGATATCGGCATGACCCAGTCGGTGAACGCGGCGATCTACCGTGAAACCGGCAACAGCCCGAGAAGCTTCGACCTGGCGCGCTACCGCAACAGCCA ATGGACCAGCAACCTGGACCTGGGGCGAGAATTCGAACTGGATTTCCTCGCTGCTCCGCTGGCGTTGTCGCTGGGTGCGGAATACCGGCGGGAAAGCTAC CGCATCGACGCCGGCGACCCGGCGTCCTACTACAGCGGCGGGGCGGAATCCCTGGCTGGCCTCTCGCCGCTCAGCGAGGGGCAATGGTCGCGGCACGCCT GGGCGTCCTACCTGGACCTGGGTACCTCCCTGACCCCAGCCTGGGAGGTCGACGTGGCGGTGCGCCACGAGAAATTCAGCGACTTCGGCAGCACCACCAA CGGCAAGTTCGCCACCCGTTACCAGTTCGATCCGCGGGTGGCGCTGCGCGCCAGCGTAAGCAGCGGGTTCCGCGCGCCGTCCCTGGTCCAGGAGCACTAC ACCGGCCTCAGCGTCGGCCCGACCATCGCCCTTGGCCTGCTGGCGGCCAACTCGCCGGCGGCGAAGATGCTCGGCGCCGACGAACTGCAACCGGAGAAGT CGACCAGCTTCAACCTTGGCCTGGTACTCAGCCCGTGGGAAAACGTCGGGCTGAACATCGACGCCTACCAGATCAGCATCCGCGACCGCATCGTCGACAG CGCCACCTATTCCGGCCAGGAAGCCATCGATGCCCTGGCCGCGGCGGGGATCTCGTTGCCGGCCAGTGCCAGTACGGTCAGTACCCACTACCTGGCCAAC GGTGCCGACACCCGCACCCGCGGTGTCGACATCACCGGTCACTACCTCGTCGCGCTTGGCGAGTACGGGCAGGTCGACTGGGAACTGTCGGCCAACTTCA ACCGCACCACCTTGCGCAAGAACCATCGAGGCGCCAACGGCGAGCCGCTGCTCAATGCCCAGCAGGTCGCCTGGATCACCAGCTCCACCCCGCGCAGCCA GGTTTCCCTCGGCGGCACCTGGAGCCGCCAGGACTGGGAGGTCAGCCTGCGCCTGACGCGCTACGGCCGGACCAGCTCGGAACTCGACTACACGGTAGGG CCGGACGCCTGGTCGACGGAGAAATTCAACCATTTCGTCAACGACCCGAAGTACATCACCGACATCGCCGCGCGCTACCGGCTCAGCGCCGACCTGACGC TGACCGCCGGCGCCGACAACCTGTTCGACGTCCGTCCGGACAAGCTGCCCGCGCAGAACACCACCTATGGCGACGTGCTGCGCTACGACACCTATGCCTC GCAGATCGGCTTCAACGGCGCCTTCTACTACCTACGCGCGGCATACCGCTTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGGCCAGGCGTGGCGCAACGAGAATTTTCCGCGACCAGCGGCGGCGTGCTGCTGGCGTCGGTGGTGGCGATCATGCTCGGGCCCACCGGCATCCTGCTG AACACCTTCAGTCTGTTCATCGCACCGATGAGCGGCGAGTACGCCTGGGACCGCGCCGAGGTGTCGTTGCTGGTGACGCTGTTCGGACTGGCGGTCGCCA TCACCAGCCCGCTCAAGGGCTGGCTGATCGACCGTTGGGGCGCGCGGCGGACAATGCTCGGGCTGACCGCGGCCCTGTCGCTGCCGCTGCTCGGCCTGGC GGCGGTGAATGCCGTCTGGCAACTCTACGCGCTGTTCCTGCTGATCGGCCTGCTGGCGCCAGGCAACCTGCCTTACGGACGTATCCTCGGACTCTGGTTC CGCCAACGCCTGGGCGTGGCCTACGGCCTGCTAGGCCTGGGCTTCGGGGCAGGCGGGCCGCTGGGCCTGCTGGTCGGCCACCAGAGCCTCGAAGCGTGGG
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| Amino Acid Sequence |
>membrane protein
MPDVRLSSRSLTPVLCAVGLACALQGEVQAADGGPRDAATAPRVFDIAPGELAEVLLNIVRQGHVPIAFDQRLVAGLRGPDIRGRLSVEDALRRALAGSG LAYAQDESGAFVLRRGQAPVQETRGAAVAPTLSTVVVTGTRKSDVRAQDSLSPIDVVSATQLRSSGAVDLRDALVKLLPSLTRQAQPFNASALTHTQSLR GLSPNHVLVLVNGKRRHETANLNISGGLEKGSTGVDLDTIPINAIERVEVLRDGASAQYGSDAIAGVINVILKSADSGGSAAADVGQTGDGDGFTHGGGG NIGLAFGDSGFVNLTAEYREQERTMRSGIDERTGRRDNISMGDPAFHRQSLALNSGFGLGDDIEVYGFGTYTRRKASSAANYRLASVAPTLYPDGFTPRP NSDEDDYAFLAGVRGERLLDAWHWDLSSGYGADRPDIGMTQSVNAAIYRETGNSPRSFDLARYRNSQWTSNLDLGREFELDFLAAPLALSLGAEYRRESY RIDAGDPASYYSGGAESLAGLSPLSEGQWSRHAWASYLDLGTSLTPAWEVDVAVRHEKFSDFGSTTNGKFATRYQFDPRVALRASVSSGFRAPSLVQEHY TGLSVGPTIALGLLAANSPAAKMLGADELQPEKSTSFNLGLVLSPWENVGLNIDAYQISIRDRIVDSATYSGQEAIDALAAAGISLPASASTVSTHYLAN GADTRTRGVDITGHYLVALGEYGQVDWELSANFNRTTLRKNHRGANGEPLLNAQQVAWITSSTPRSQVSLGGTWSRQDWEVSLRLTRYGRTSSELDYTVG PDAWSTEKFNHFVNDPKYITDIAARYRLSADLTLTAGADNLFDVRPDKLPAQNTTYGDVLRYDTYASQIGFNGAFYYLRAAYRF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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