Pseudomonas aeruginosa 19BR, IAI_RS0109610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTTGCTCGAACAGGCTGGGGTGCAGGCGGATGTCCACCATCATCCAGTCGGCCACGATGAACAGCGCCCAGATCAGGAACGCCACCCCGATGGCAGCGC GCCGCTGCATCAGCGAGTTCCAGCTGAGAAACTCGCGAAACTCGTTTTCCAGCTCCTTTTCGAACCGCAACCAACGAAAGCCGTTGCGCAACTGGCGCGC ATACGGATTATCCGGCAGACCAGCCTGTACCAGGCTGTCGCGTGCAAGCATGCTGACTCCCCTACCTCGGACCGAACGCTGAAACAGGCCTGGACGACAA TACCCTGGCGCCTCTGCAGCGATGAGTCAAAAAGCCATCACCCGTTACCAGACAATAGGGCATGCGGCGTGCCGAGGCGATACCAACCATCGGCGCAGCG GGACGCCCCGGGCGAGCGAATGGCAAGATCCGTGGGCCGACTGGCATTGCGGCCAGGCCCGAAGGACGCCAGACTGCCGCCATCGCCATGAGGTTGTGCC
|
|
| DNA Sequence for Gene |
>IAI_RS0109610
ATGCCCGAACCGCGCCTGATTGCCTGCCTGATCTATCCCGACGTGATGAGCCTGGACGTGACCGGACCGCTGCAGGTATTCGCCTCGGCCAACGTCGAAC GCCAGCGCCAGGGCCTGCCGCCTTTCTACCGGATACAGGTGCTCGGCGAGCGTAGCGAAGCGGTGCCCAGTTCCGCGGGCATCCGCATCTGCGCCGACCT CGCCTGGCGCGACTGTCCGCCGGAAAGCCTGGACACCCTGTTGGTGCCCGGCGGCCTCGGTGTCGAGGCGCAGACCCGCAACGCCGACCTGCTCGCCTGG CTGAAAGCCGCCGAACCGTGCATACGGCGGCTCGGCTCGGTGTGTTCGGGAGCGCTGATCCTGGCCGCCGCCGGGGTTCTCGACGGGCGCCCGGCGACCA CCCACTGGGCCGACGTGGCGACGCTGCGCCAGGGGTTTCCCGGCGTCCATGTGCAAGGCGACCGCCTGCACACCTACGACCCGCGGTGCCGCGACGGCGA CGCCCACATCTTCACCTCGGCCGGCGTCACGGCGGGAATCGACCTGGCCCTGGCGCTGGTCGAGGCCGACCTCGGCCGCAGCCTGGCGCTCAGCGTCGCG CGACGCCTGGTGATGTTCCTCAAGCGTCCTGGCGGCCAGGCCCAGTTCAGCGCCTGGCTGACCCCGGAACCGAGCCGCACCCCGCGTCTGGCCGCGCTGC TGGAGTGGATTCCCGCCAACCTCGCCGGCGACCTGTCCCTGGAAGCCCTCGCCGACCAGGCCTGCATGAGCCCGCGTACGCTGTCCCGGGTATTTCTCCA GGAACTGGGCGTGGCGCCCGGTCGCTACGTCGAGCGGGTTCGCCTGGAGGCCGCGCGCGCCCTGCTGCAGGACGCCCAGGCGTCGATCGCCACGGTGTCC CGGCTGTGCGGCTTCGGCCATCCGGAAAACCTCCGGCGGACGTTCCACAAGCATCTTTCGGTCAGCCCCCAGGAATACGCCGAACGCTTCGGCATGCTGG CCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCTCCCACCGAGGACCTTCCCATGCTGGAACTGCGCCCCAACTGCGAGTGCTGCGACCGCGACCTGCCCGGCGACAGCGGCGACGCGCTGATCTGCACC TTCGAGTGCACCTTCTGCCGCGACTGCGCGACGGTCCGCCTGGGCGGCCAGTGCCCGAACTGCGGCGGCGAACTGCTGGCCCGGCCAAGGCGTCCGCGGG ATGCGCTAGCCCGTCACCCCGCCTCCAGCCGACGCGTCGTCAGGCCCGGCGGTTGTCCGGAGTGACGCCATGCTGCTACGCAACCCGACCCTGCTCCTGC TGTTCTGCGGCCAGGCCCTGTACTGGTCCTGCTCGCTGATCGGCATAACCCTGACCGCCCTGGTCGGCGTCCAGCTGGCGCCGTTGAACAGCCTGGCCAC CCTGCCCCTGGCCCTGCTGGTGCTGGGCAACCTGCTGGCGGTGCAGCCGTTGTCGCACTTCATGCAGCGCCACGGCCGACGTCCCGGGCTGATGCTCGGC
|
|
| Amino Acid Sequence |
>transcriptional regulator
MPEPRLIACLIYPDVMSLDVTGPLQVFASANVERQRQGLPPFYRIQVLGERSEAVPSSAGIRICADLAWRDCPPESLDTLLVPGGLGVEAQTRNADLLAW LKAAEPCIRRLGSVCSGALILAAAGVLDGRPATTHWADVATLRQGFPGVHVQGDRLHTYDPRCRDGDAHIFTSAGVTAGIDLALALVEADLGRSLALSVA RRLVMFLKRPGGQAQFSAWLTPEPSRTPRLAALLEWIPANLAGDLSLEALADQACMSPRTLSRVFLQELGVAPGRYVERVRLEAARALLQDAQASIATVS RLCGFGHPENLRRTFHKHLSVSPQEYAERFGMLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|