Pseudomonas aeruginosa 19BR, IAI_RS0106570

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details]
DNA Sequence Upstream of Gene
CCGCCAGCCCGCTGGCCGGCAGCGAACGCGGCGAGCTGGCCGGCGCCGCGCTGGTGCAGTTGCAGGCCACCTGGCGGCAGTGGTGCCGCAGCCATGCTCC GGCCGGGACGGCGCTGCGCGCGGACCCGCTCCCCGGAGCCGGGCGCTAGTTCTGCGGTGGCCGCCCACATTGACCGCGCAAGCCCCGAACCACTAAGCTG CGCGCCTTGCGACAGGTGCCCCGCAAGGGGTGAAACAGGGAAGCTGGTGCGTTCCGTCGGAACCAGGCCAGCGCTGCCCCCGCAACGGTAGGCGAATCAG ACAGCCGCTCGATGACCACTGTGCTCCGGCATGGGAAGGCGCGGCTGGAAGCGTCCAGCGCTTCGCTCGCGAGCCCGGAGACCGGCCTGACGCACCCACG GCATCGCGGAGGGCGCTGTCGGACGTCTCCTGCCGTCGCTTCGTCCTCCGTCTGCCTCAACCCAGGTCGCGCGGGTGAGAGCGACGGAGCAGCGCAGAGC
DNA Sequence for Gene
>IAI_RS0106570
ATGAACAGAGTTTTCCTGACCCCGGCAGCCGTGGCGCTGTGCGGCGCGTCTTCCCTGAGCCTGGCCGAACCGGTCAGCCTTGCCGACCAGGTGGTGACCG CCACCCGTACCGCCCAGACCGCTTCCCAGAGCCTGGCGGCGGTGAGCGTCATCGACCGCGAGGATATCGAGCGCAGCCAGGCGCGCAGCGTGCCGGAGCT GTTGCGCCAGGTACCCGGCGTGTCGCTGGCGAACAACGGCGGTTTCGGCAAGAACACCACGCTGTTCCTACGCGGCACCGAGTCCGACCATGTGCTGGTG CTGATCGACGGCATCAAGGTCGGCTCGGCCAGCGCTGGCCTCACCGCGTTCCAGGACTTGCCGGTGGAGCTGATCGAGCGCATCGAGGTGGTCCGCGGGC CGCGTTCCAGCCTGTACGGCTCGGAGGCCATCGGCGGGGTGATCCAGATCTTCACCCGGCGCGGCGACGGCCAGGGCGCCAAGCCGTTCTTCTCCGCCGG TTACGGCACCCATCAGACCCTGGAGGGCAGCGCCGGGGTCAGCGGCGGCGCCGGCAACGGCTGGTACAGCCTCGGGGTGAGCAGCTTCGATACGGCGGGG ATCAATACCAAGCGCGCCGGTACTGCGGGCTATGAGCCAGACCGAGACGGCTACCGCAACCTGTCCGGCAACCTGCGCGGCGGCTATCGCTTCGACAATG GCCTGGAACTCGACGGTACCCTGCTGAGGGCCAAGTCGCACAACGACTATGACCAGGTCTTCGGCAACTCCGGTTTCAATGCCAACGCCGACGGCGAGCA GAACCTGGTCGGCGGCCGTGCCCGCTTCACTCCGTTCGATCCCTGGCTGGTGACCCTCCAGGCCGGGCGCAGCGAGGACAAGGCCGATGCCTATCAGGAT GGCCGTTTCTACTCGCGCTTCGATACCCGTCGCGACAGCCTGTCCTGGCAGAACGACCTGACTCTGGCCGAAGGCCATGTGCTGACCCTCGGCTACGACT GGCAGAAGGACGAGATCAGCAGCAGCGAAGCCTTCAGCGTCGACTCGCGGCTGAACAAAGGCTGGTTCGCCCAGTACCTCGGCCAGTACGGTCGCCAGGA TTGGCAACTGAGCCTGCGCCGCGACGACAACCAGCAGTTCGGCGTGCACGACACCGGCAGCGCCGCCTGGGGCTACGCGCTGAGCGACGCGCTGCGCTTC ACCGTCAGCTACGGCACGGCGTTCAAGGCGCCGACCTTCAACGAACTCTACTACCCCGACTACGGCAATCCCGACCTGGACGCCGAGACTTCGCGCAGCC TGGAAGTCGGGCTGAGCGGTACGCATGGCTGGGGGCACTGGGCGGTAAATGCCTTCCGTACCAACGTCGACGACCTGATCGGCAACGATCCGCGTCCGGC GCCGGGGCGCCCCTGGGGGCAGCCGAACAACATCGACGAAGCGCGCATCCGTGGCGTCGAACTGGTCCTCGGCAGCCAGTGGCTGGGCTGGGACTGGAAC GCCAACGCAACCTTCCTCGACCCGCAAAACCGTTCCGGCGGCGTCAACGACGGCAACGAGCTGCCGCGCCGGGCGCGGCGGATGTTCAACCTGGAACTGG ACCGGCGCTTCGAGCGTCTTTCGCTGGGCGCCAGCGTGCACGCCGAAGGCCGACGCTATGATGACCCGGCCAACAAGGTGCGCCTGGGCGGCTACGCCAC CCTCGACCTGCGCAGCGAGTACCGGCTGAACGACGAATGGCGCCTGCAGGGCCGGATCGCCAACCTGTTCGGTGCCGACTACGAAACCGCGTATGGCTAC AACCAGCCTGGCCAGGCGGTCTACCTCAGCGTGCGCTACCAGGCTCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCGGGTATTTCGAATGAACGAGGCGACGGCGCGGCCGCGTCGCCGCAAGGAGTGATCGACGATGAACGAATCCCCCGAGAAGGACCAGCGCCACCGCG AGCGGATGGAGCGCAAGAAGGCCGTGGTCGACGAGAAGATCGCCCAGGCCCGCGACGAACGCGGCGTGCTCCTGGTGCATAGCGGCAACGGCAAGGGCAA GAGCAGCTCGGCCTTCGGCATGGTCGCGCGGGCCCTGGGCCATGGCATGAAGGTCGGTGTCGTGCAGTTCATCAAGGGCGCCGCCAGCACCGGCGAGGAA GCCTTCTTCCGGCGCTTCCCCGAGGAAGTCAGCTATCACGTGATGGGCGAGGGCTTCACCTGGGAGACCCAGGACCGCCAGCGCGACATCGCCAAGGCCG AGGCGGCCTGGAAGGTCGCCGCGCAATTGCTGGCCGACCCGGACGTTGGCCTGGTGGTGCTGGACGAACTGAACATCGCCCTCAAGCACGGCTACCTGGA
Amino Acid Sequence
>ligand-gated channel protein
MNRVFLTPAAVALCGASSLSLAEPVSLADQVVTATRTAQTASQSLAAVSVIDREDIERSQARSVPELLRQVPGVSLANNGGFGKNTTLFLRGTESDHVLV LIDGIKVGSASAGLTAFQDLPVELIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGDGQGAKPFFSAGYGTHQTLEGSAGVSGGAGNGWYSLGVSSFDTAG INTKRAGTAGYEPDRDGYRNLSGNLRGGYRFDNGLELDGTLLRAKSHNDYDQVFGNSGFNANADGEQNLVGGRARFTPFDPWLVTLQAGRSEDKADAYQD GRFYSRFDTRRDSLSWQNDLTLAEGHVLTLGYDWQKDEISSSEAFSVDSRLNKGWFAQYLGQYGRQDWQLSLRRDDNQQFGVHDTGSAAWGYALSDALRF TVSYGTAFKAPTFNELYYPDYGNPDLDAETSRSLEVGLSGTHGWGHWAVNAFRTNVDDLIGNDPRPAPGRPWGQPNNIDEARIRGVELVLGSQWLGWDWN ANATFLDPQNRSGGVNDGNELPRRARRMFNLELDRRFERLSLGASVHAEGRRYDDPANKVRLGGYATLDLRSEYRLNDEWRLQGRIANLFGADYETAYGY NQPGQAVYLSVRYQAL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site