Strain | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATGACACTTTTGCGTGGCTCATAAGGAATACTCTTATTACGTGAAGCGCATCACAAAATATTGAATCGAACAGTCCAGGCGGATTGTTTTCTCCTGGTAA ACGATGATTAACGGCGCGCTCCAAGGCCGGGTTATTTCAATGAATCGCTTCAGCCAACGCCTTGCCTGCCGATAGCCTCTGCCGTCACCCGTTCCCGCCC TTGCTCCCCGCCTTGCCTGCCCCTATCCTGCGCCCGTCACGGCCAAATCCGTGACCGGGTTTGACAGCCCGAAGAGACGGCGCGATGCGCCGAGCGGTGC ATGCGAAAGCAGCGAATGCTTTTGCAGGCATCGGCTCGACCGCAGTTTTCCAACTGCGGGCCTTCATGGCGGATCGCGTGGGGAGACCCTCGTGGTCTGC CGGTTCCGTTTCCCGGTCTGTCAACCCTGCGCGATCCTGCCTCCATCGATTGACAGCGAAGGCGGCAGGTCATGTGACTCTCAGAAACGGAGTACCCAGC
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DNA Sequence for Gene |
>IAI_RS0106430
ATGACGAAGGATGAAAAGGAAAAGACCCACGTCGACGCAATCATCGAACGCTACAAGGACCTGATGGTCGAGATTCCCCCCGCCGACCGGCAACCCGGTC TCTCCCTGCTCTGGCCGGTTCCCGCCCAGCCCGCCATCGACAAGGGCGTCCGCCAGGCCGAGAACTGGCTTGCCGACCAGATCGAAGGCCAGCTCTGGAC CGCCTTCGCCTTCGGCCGCGACAGCCTGCCCACACCGATGCAGAAGACCGCCTTCGAAGTGGCCTTCCTGACGCGCCTGCAGCAGCGCCTGGTAGCCGCT CGACGTTCCGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGGCCATGGCGAATGACGCCGGTGGCGTCGTTCGCCCCTACGCCAAGTCTCCATCGCGGTCTCGGGCACCGCGTACGAAATCATCGCCAGACTCCGCC TGGCAACGCGCCGAGCGTCTGGAGCGCCCCGGTGCGCCATCCCGCCCAGCCGGATTGAACGCAAGCGCACCCACCGCCCTCCTATATTCCATGCAACCCA CCACCTCAACCGGAACCGAGCAAGACTCCGCAGACATGGCACAGCCTTTCACCATCGAACCGGACCCGAACACCCTCGACCATCCACCGGCCTTCCTGGC CAACGGAGGAGCGGTCGGGAAACTGTTGCTCAGCCTCGACGCGGCCGGTTCGCCCCTCGGCCCGCCGGACGCCTGGTCGGCGAGCCTGAAGACGACGATG GCCACGCTGCTGCCGGCCAAGGCGCAGATCGTGCTGTTCTGGGGCGCGGAATTCGTCGCCCTGTACAACGATGCCTACGCGCCGAGCATCGGCGACAAGC
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Amino Acid Sequence |
>hypothetical protein
MTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAA RRSG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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