Pseudomonas aeruginosa 19BR, IAI_RS0105080
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCGCCAGGTGTAGAACGAGGCATCACTGAAGCCGTGTCGGCGACACAGTTCCTTCACCGGTACACCGGCCTCCGCCTGCTTGAGGAAGTCGAGAATCT GCTCTTCGGTAAAACGCTTTTTCACTGCCGTCTTCTGCTCGGAAAACGGACTCTACTAAGTTCGGCGTGGTACTGAAATCGGGGAGCAGGTCATATCTTC ACCCTTGAATTGTGTTGCGGATCAAGTAGCTGAATTTTGCAGAGAGCATCACATACCCAGCGTGAATCTTGCGCGCATGAACTCGTTATCAGAGATACAT GACTCTTAGGGAATATCCCGTGGGCTCAGCCAATCCCACTCCTGAATATCGAGTTTAAGCAACCGTGATTATTACCACTATATCACAGCGCATTGACGTG CCTTCTTAGTGTATTGCCCGCACATTGAAGCCATGGGGTTCAATTTCTAGAACTGAATCGGCACTGTTTCTGTACCACACTCACCAATGGAGAAGTCTAA
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| DNA Sequence for Gene |
>IAI_RS0105080
ATGTCCAATGACAACGAAGTACCTGGTTCCATGGTTATTGTCGCACAAGGTCCAGACGATCAATACGCATACGAGGTTCCCCCTATCGATAGCGCGGCCG TTGCCGGGAATATGTTTGGCGACTTAATTCAAAGAGACATATATCTACAGAAAAACATTTATTATCCAGTCCGATCTATTTTTGAACAAGGAACAAAAGA AAAGAAGGAGATCAACAAGAAAGTATCTGATCAAGTCGATGGCTTGCTAAAGCAGATCACTCAAGGAAAAAGGGAGGCCACAAGGCAAGAGCGAGTCGAT GTCATGTCGGCAGTCCTGCACAAGATGGAATCTGATCTTGAAGGATACAAAAAGACCTTTACCAAAGGCCCATTCATTGACTACGAAAAGCAGTCAAGCC TCTCCATCTATGAGGCCTGGGTCAAGATCTGGGAGAAGAACTCTTGGGAAGAAAGAAAGAAGTACCCTTTTCAGCAGCTTGTTAGAGATGAACTGGAGCG GGCGGTTGCCTACTACAAACAAGATTCACTCTCTGAAGCGGTAAAAGTGCTAAGACAGGAGCTCAACAAGCAAAAAGCACTAAAGGAAAAAGAGGACCTC TCTCAACTGGAGCGGGACTACAGAACCCGAAAGGCGAATCTCGAGATGAAAGTACAATCCGAGCTTGATCAAGCGGGAAGTGCTTTGCCTCCATTGGTCA GTCCAACGCCAGAGCAATGGCTTGAACGTGCCACAAGACTGGTTACGCAAGCAATTGCTGATAAAAAGCAGCTGCAGACCACAAACAATACTCTTATCAA GAATTCCCCAACCCCTCTAGAAAAGCAGAAAGCCATCTACAATGGTGAGCTACTTGTGGATGAGATAGCCAGTCTACAGGCCCGCTTAGTTAAGCTGAAC GCCGAAACGACACGACGCAGGACAGAAGCAGAACGCAAGGCGGCCGAGGAACAAGCGTTGCAAGATGCTATTAAATTTACTGCCGACTTTTATAAGGAAG TAACTGAGAAATTTGGCGCACGAACATCGGAGATGGCGCGCCAACTGGCCGAAGGCGCCAGGGGGAAAAATATCAGGAGTTCGGCGGAAGCAATCAAGTC GTTTGAAAAGCACAAGGATGCGTTAAATAAAAAACTTAGCCTTAAAGATAGGCAAGCCATTGCCAAAGCCTTTGATTCTCTAGACAAGCAGATGATGGCG AAGAGCCTTGAGAAATTTAGCAAAGGCTTTGGAGTTGTAGGCAAAGCTATTGACGCCGCCAGCCTGTACCAAGAGTTCAAGATATCTACGGAAACCGGGG ACTGGAAACCATTCTTTGTAAAAATTGAAACACTAGCTGCTGGTGCGGCCGCCAGTTGGCTTGTGGGTATTGCATTTGCCACGGCAACAGCCGCTCCTAT AGGCATTCTGGGGTTCGCACTGGTAATGGCAGTTACCGGGGCGATGATTGACGAAGACCTTCTAGAAAAAGCAAACAATCTTGTAATATCCATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCAAGCAAGGCCTCATTAAACCCTACGAGGCCTTTCCATACTTATAGAATAAAAAAACCATCCCCAAGGGAATTGAAAACAAATAACAAGACAAATAA AAGACTGCATACAAACCTGTTTTGGCAGGGGTTTCGGAGAAAAAACCCGTGACCCAGAACTCTCTTTCCGTATATTTTAAAGCGAAGTCTTCAACAAGCT TTACCGAGAAAGGAAACAGGATAGTACTGAGCCCAGCCACTACCAAGGGGTTAACTGATGCCAGGCTGGGAAATACGGAGCCTTTCCAAGCCACTAAAAC AAAGAAGAAAGCTCCCCAGAAAAACTTAGCCCAATAGTATTTAAAGCTCAATTAGCACCCCGTTCTGTCTGACCTGAGTTCAACAAAGCGTTCTAAACGA TTAGAACTTCTATCTTATCCATTTCTAACAACGATTCCCACCTAGCTCCCTTTAGTAGGCGTAACATGAAAAACCTTCATCGCTCCTAATCCGTTTCCCT
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| Amino Acid Sequence |
>pyocin S5
MSNDNEVPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQRDIYLQKNIYYPVRSIFEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVD VMSAVLHKMESDLEGYKKTFTKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEAVKVLRQELNKQKALKEKEDL SQLERDYRTRKANLEMKVQSELDQAGSALPPLVSPTPEQWLERATRLVTQAIADKKQLQTTNNTLIKNSPTPLEKQKAIYNGELLVDEIASLQARLVKLN AETTRRRTEAERKAAEEQALQDAIKFTADFYKEVTEKFGARTSEMARQLAEGARGKNIRSSAEAIKSFEKHKDALNKKLSLKDRQAIAKAFDSLDKQMMA KSLEKFSKGFGVVGKAIDAASLYQEFKISTETGDWKPFFVKIETLAAGAAASWLVGIAFATATAAPIGILGFALVMAVTGAMIDEDLLEKANNLVISI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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