Pseudomonas aeruginosa 19BR, IAI_RS0103965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 239 376 4.8E-11
FunFam G3DSA:2.30.42.10:FF:000037 Periplasmic serine endoprotease DegP-like - - 268 369 1.5E-34
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 252 358 4.05E-23
FunFam G3DSA:2.40.10.120:FF:000007 Periplasmic serine endoprotease DegP-like - - 28 263 2.4E-106
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 107 119 4.5E-53
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 202 219 4.5E-53
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 310 322 4.5E-53
Pfam PF13365 Trypsin-like peptidase domain - - 98 231 1.0E-34
Pfam PF13180 PDZ domain IPR001478 PDZ domain 386 466 1.4E-9
CDD cd00987 PDZ_serine_protease - - 270 359 9.87851E-27
Gene3D G3DSA:2.40.10.120 - - - 27 263 1.6E-85
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 381 474 1.1E-17
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 23 362 8.7E-102
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 224 241 4.5E-53
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 268 369 3.4E-28
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 128 148 4.5E-53
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 385 472 4.86E-15
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 6 279 2.64E-70
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 168 192 4.5E-53
NCBIfam TIGR02037 JCVI: Do family serine endopeptidase IPR011782 Peptidase S1C, Do 28 470 0.0
Pfam PF13180 PDZ domain IPR001478 PDZ domain 272 359 2.8E-17
SMART SM00228 pdz_new IPR001478 PDZ domain 270 352 3.9E-15
CDD cd00987 PDZ_serine_protease - - 385 470 9.66653E-18
SMART SM00228 pdz_new IPR001478 PDZ domain 384 463 3.7E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.