Pseudomonas aeruginosa 213BR, IAK_RS0127605
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 213BR 213BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCACCGTCGGCGGCAACTGGAAGGTCCAGGCGAAGTTCACCAGGGTCAGTTCCAGCGCCACCAGGAACAACCCGCGCTTGAACAGGAACGCCGAGACCG CCCGGCGTCCCTGGTGCTTCTCGCCGTAGAGGAATGCCGACAGGCCGGTGAGGAAGACGAACACCGGCGCGCACAGGTGCGCCAGGGTGCGGCTGAGGAA CAGCGCCGGCTCGGTGCTGGCGACGTCCATCGGGTCGCCGACCTGGCGGTGCAGGAAAAAGGTCTCGCGGACATGGTCGAGCAGCATGAACAGCATCACC AGGCCGCGCAGGGCGTCGATGCTGTGCAGGCGGGAGGAATTGGAGATGGAGTTGGGCATGGCTGGGCTGGTCGTCGGAAAAGAGGGATGAGTATCACAGC CTGGCGGCGAGACGCGAGATAGAGCCGGGCATTGTATTGCGAGGCCGGAATCGAACTGGTAGCGTTATAGTATATCATTTCTTTTCTGGTGCGATTTCCC
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| DNA Sequence for Gene |
>IAK_RS0127605
ATGAGAGTCAGTGTGTCGCTTGTCCTCGGTGTCGGCCTCGGTTGCAGCAGTCCGGCGCTCTGGGCGGAAACGGAAAGTCCCGCAGAGCTTGAGGTCCTCA CTGTCACCGCCGAAGCGGAGCGCGCGGAGGGCCCGGTGCAGGGCTACCGGGCCAATCGGACGGCCAGCGCGACGCGCACCGACACCCGTATCGAGGACAT CCCGCAAGCCATCAGCGTGGTGCCGCGCCAGGTGCTCGACGACCTTGACAGCGCTCGTATCGAACGGGCGCTGGACTTCGCCGGCGGGGTCTCGCGGCAG AACAACTTCGGCGGCCTGACGATGTTCGAGTACAACGTCCGTGGCTTCACCACTTCGGAGTTCTACCGCGACGGCTTCAGCGCCAACCGCGGCTATATGA ACGCCCCGGACAGCGCCACCATCGAGCGCGTGGAAATCCTCAAGGGACCGGCCTCCAGCCTTTACGGGCGCGGCGATCCCGGCGGCACGGTGAACCTGGT GACCAAGAAGCCCCAGGCCGAGCGCTTCGCCCGCCTGCATGCCAGCGCCGGCAGTTGGGACCGCTACCGCTCGACCCTGGACCTGAACACGCCGCTGGAC GAAGAGGGCGACCTGCTCTACCGGATGAACCTGGCGGTGGAGGACAGCAAGGGCTTCCGCGACTACGCCGACGGCCAGCGCCTGCTGGTGGCGCCATCGT TCAGCTGGCAACTGGACCCGGACACCTCGTTGCTGGTGGAAGCCGAGGTGGTGCGCAACCGCCAGGTCTTCGACCGCGGCACCGTGGCGCCGCACAACCA CCTGGGCAGCCTGCCGCGCTCGCGGTTCTTCGGCGAACCGGACGACGGCAAGATCGACAACAACAACGAAACCCTCCAGGCCACCCTGCGCCATCACTTC AACGAGCAGTGGAGCCTGCGCCTGGCCAGCCACTACAAGCATGGCCACCTGGACGGCTACGCCTCGGAGAACTCCAGCCTCGCCGCCGACGGCTACAGCC TGCGCCGGGAGTACCGCTACCGCGACTTCGAGTGGCACGACAGCATCACCCAGCTCGACCTGCTCGGCGACCTCCATACCGGCTCGATCCGCCACCAGTT GCTGATGGGCCTCGAGTACGAGCGCTACCACAACGACGAACTGATCCTGCGTAGCATCCCGTCGCGCAACCCCTATGCCATCGACATCCGCCGGCCGGTC TACGGCCAGCCGAAACCACCCTTCGGACGCGACGACCGCAACCACGAGGAAGTCGACGCGATGGCCCTCAACCTGCAGGACCAGATCGAGTTCAGCGAGA AATGGCGCGGCCTGCTCGGCGTGCGCTTCGACCGCTACCGCCAGGACATGAACGCCACGCGCCTGAACAATGGCCGCTTCCGCGACACCAGCTCGCAGCA GACCCAGCGTGCCGCCACCCCGCGCATCGGCGTGCTGTACCAGGCGACCCCGGAGGTCGGCCTGTTCGCCAACGCCTCGAAATCCTTCAAGCCCAATGGC GGTACCGACATGGCCGGCAAGGCCTTCGACCCGGAGGAGGGGCGCGGCTACGAGGCGGGGGTGAAGCTCGACCTGCTCGATGGCCGGCTGGGCATGACCC TCGCCGCGTTCCACCTGAAAAAGAAGAACGTGCTCACCGCCGACCCGAGCAATCCCGGTTACCAGCAGACCGCCGGCGAGGCGCGCAGCCAGGGCTTCGA CCTGCAGTTCAGCGGCCAGCTCACCGAGCAGTTGCGGCTGATCGGCGCCTACGCCTATATCGACGCCGAAGTGACCAAGGATGAGAACATCGCTCGCGGC AGCCGCCTGCTCAACGTGCCGAAGCACAGCGGCAGCCTGATGGGCGTCTACGAGTTCCGCGAAGGCTGGCTGCACGGCGCCGATGCCGGCGCGGCGGTCA ACTATGTCGGCGAGCGCGCCGGCGACAGCAGCGACAGCGGCTTCGAACTGCCGGCCTACACCACCGTCGACCTGCTCGCGCACTATCCGCTGGCGAGCAA TGCCACCCTCGGGGTGAACGTCAACAACCTCTTCGATCGTCGCTACTACGAGCGTTCCTATAACAACGTCTGGGTCGCCCCCGGCGAGCCGCGCAACCTG ACCATGAGCCTGACCCTGAACTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCTACCGCCGCCAGGAAGCCATGCCATGCAAGGACGCACACCGCTGCTGGAAACCCTCCGCGAACTGGAATGCGAGATTCGCCTGCTCACCGTCTATG CCCGCGAGTGTTGCGGCTGCTACGAGATCCTTAGGCGCAAGCTCGACCGTCTGAGCGGACTGATCGGGGAGGATTGCAGCCGGGCGCAGTGGCAGGCCGA TTCGGACGATCCTGCGTTGCAGGCGCTCGGCCTGCGCCTGCGCGACGCGGCGGTGCAGGCCCTCTGCGAACTGGAGAAGCACCTTTGCCAGGGCGTGCTG CATGAACCCGGCGAGATGGGCCGCTACCTGGGTAGCCTGCTGGAATCCATCCGCGGCGAACTCGACAGCGCCGGGATAGATGCCGATGCACGGGTCCTGT TCGTCGGCTCCGGTGCCCTGCCGACCTCGGCCCTGGTGCTGGCGCGGGAGGTCGGCGCACATTTGTGCTGCCTGGACATCGACGAGGAGGCCCTGGGCTG
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| Amino Acid Sequence |
>TonB-denpendent receptor
MRVSVSLVLGVGLGCSSPALWAETESPAELEVLTVTAEAERAEGPVQGYRANRTASATRTDTRIEDIPQAISVVPRQVLDDLDSARIERALDFAGGVSRQ NNFGGLTMFEYNVRGFTTSEFYRDGFSANRGYMNAPDSATIERVEILKGPASSLYGRGDPGGTVNLVTKKPQAERFARLHASAGSWDRYRSTLDLNTPLD EEGDLLYRMNLAVEDSKGFRDYADGQRLLVAPSFSWQLDPDTSLLVEAEVVRNRQVFDRGTVAPHNHLGSLPRSRFFGEPDDGKIDNNNETLQATLRHHF NEQWSLRLASHYKHGHLDGYASENSSLAADGYSLRREYRYRDFEWHDSITQLDLLGDLHTGSIRHQLLMGLEYERYHNDELILRSIPSRNPYAIDIRRPV YGQPKPPFGRDDRNHEEVDAMALNLQDQIEFSEKWRGLLGVRFDRYRQDMNATRLNNGRFRDTSSQQTQRAATPRIGVLYQATPEVGLFANASKSFKPNG GTDMAGKAFDPEEGRGYEAGVKLDLLDGRLGMTLAAFHLKKKNVLTADPSNPGYQQTAGEARSQGFDLQFSGQLTEQLRLIGAYAYIDAEVTKDENIARG SRLLNVPKHSGSLMGVYEFREGWLHGADAGAAVNYVGERAGDSSDSGFELPAYTTVDLLAHYPLASNATLGVNVNNLFDRRYYERSYNNVWVAPGEPRNL TMSLTLNY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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