Strain | Pseudomonas aeruginosa 213BR 213BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ATCCCATGAAAAACCGCTAATCCTGGCAGTTCATCCCACTCTTTCGGATTAGTACCATCGAATGGCTTTCCAGACTCACGGAAAGCCTAAAGGAGATATA TGAAATGAAAGAACTCAATGACATTGAAGTCACCTGCGTTTCGGGTGGAACTCTTTCCGGCATGATCGTAGGCGCCGTCGACGGCGCCGCGACGGGCATG GCAATCGGCGGGAAATGGGGCGGTGCCGGCGGCTTCGGCTTCGGCGCTCTTTCCCAGTTGGTCGGCCTGATCGTGCCAACCGCCATGGGTGCTATTGCCG GGGGCACGGTCGGTCTCTTCACCAATGCAGAGACGGCTGTCGGTTACTTGGGCCAATACCGGGAAAACTTCGGTCCCGGTGATGTAGGCCGCACCACCAT CTAATTAGAAAAGTCGCACTCCGGCACTTCATGCGTTTGAACTTTCGCAAGGGTGTCGGAGTGTCATGCAAGTATTATTCGAATCCAGGATCCAGCCACC
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DNA Sequence for Gene |
>IAK_RS0123350
ATGTTTCGCCAGGAAGCCCTCGACGCCCAGCATGCCGGCGGCCTGGGCGAGATCGTGCTGATCCGCCCGGTCTCCTTCACTTTTCTCACCCTGCTGGCCG CGGCGATGGCGCTGCTGGTGGTGGGCTTCTTCCTGTTCGGCAGCTACACCAAGCGCAGCACCGTCAGCGGCCAATTGGTGCCCGCCAGCGGCCAGGTCAA GGTGCACGCGCCGCAGGCCGGCATCGTGCTGCGCAAGTTCGTCCAGGAAGGCCAGGCGGTACGACGCGGCGAGCGCCTGATGGTGCTTTCCAGCGAACGC TACGGCAGCGATGCCGGGCCGGTGCAGGCCGGTATCAGCAGGCGCCTGGAACAACGCCGCGACTCCCTGCGCGACGAACTGGAAAAGCTTCGCCGCCTGC AAGACGACGAGCGCGACAGCCTGACCAGCAAGGTCGCCAGCCTGCAACGCGAACTCACCACCCTCGCCGCCCAGACCGACAGCCAGCAACGCCTGCTGGC GCTGGCCAGCGACGCCGCCGCGCGCTACCAGGGGCTGATGGACAAGGGCTACATCTCCATGGACCAGTTGCAGCAGCGCCAGGCCGAGCTGCTCGGCCAG CGCCAGACCCTGCAAGGCCTGGAGCGCGAACGCACGTCGCTGCGGCAGCAGTTGACCGAGCGCCGCAACGAACTCGCCGGGCTTTCCGCGCGCCAGGCCA ACCAGCTCGCGGAAACCCGCCGCCAGCTCAGCGCGGTGGAGCAGGACCTGGCCGAAAGCGAAGCCAAGCGCACCTTGCTGGTCACCGCGCCGGAGAGCGG CATCGCCACCGCCGTGCTCGCCGAAGCCGGGCAGACCGTCGACAGCTCGCGTCCGCTGCTGAGCATCGTTCCCGCCGACACCCCGTTGCAGGCCGAACTC TACGCGCCGAGCAAGTCCATCGGTTTCATCCGGCCGGGCGACGCGGTGCTGATCCGCTACCAGGCCTATCCGTACCAGAAGTTCGGCCAGTACCACGGCA AGGTGCAGTCGATCTCCCGCGCCAGCGTCTCCTATGCCGAGCTTTCCAGCATGGTCGGCGGCGTACCGGGGCTCGGCCAGGATGGCGAGCAGCTGTACCG GCTGCGGGTAACCCTCGACGACCAGGCGGTGACCGCCTACGGCCAGCCGCGTCCGCTGCAGAGCGGCATGCTGCTGGACGCCGACATCCTCCAGGACACC CGGCGCCTCTACGAATGGGTGCTGGAACCGCTCTACAGCCTGACCGGCAAACTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAACGACCCATGGCCTTTCTCGACGCTCTCGCCCTGCGCCTGGGCCGCCGCCTGCCGCTGGTGCTGCAGACCGAAGCCACCGAATGCGGCCTGGCCTGCC TGGCGATGATCGCCGGCTACCACGGCCACCATACCGGCCTGATGGAACTGCGCCGGCGCTTCTCCGTATCGCTCAAGGGCATCTCCCTCAAGCAACTGAT CCAGACCGCCCACCGCCTCGGCCTGGGTACCCGCGCGGTGAAGCTCGACCTCGGCGACCTCGGCAAGCTCAAGCTGCCCTGCGTGCTGCACTGGAACTTC AACCACTTCGTCGTGCTCAAGGCGGTCGACGGGCGCGGCGCGGTGCTCCACGACCCCGCCCACGGCCAGCGCCGGCTGGGCCTGGAGGAAGTCTCGCGGA GCTTCACCGGGGTAGCCCTGGAACTCTGGCCGGAGAGCGGCTTCGAGAAACAGGAGGCGCCGCCGCGGATCAAGCTGCTGGGCATGCTCGGCAAGGTCAC
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Amino Acid Sequence |
>secretion protein
MFRQEALDAQHAGGLGEIVLIRPVSFTFLTLLAAAMALLVVGFFLFGSYTKRSTVSGQLVPASGQVKVHAPQAGIVLRKFVQEGQAVRRGERLMVLSSER YGSDAGPVQAGISRRLEQRRDSLRDELEKLRRLQDDERDSLTSKVASLQRELTTLAAQTDSQQRLLALASDAAARYQGLMDKGYISMDQLQQRQAELLGQ RQTLQGLERERTSLRQQLTERRNELAGLSARQANQLAETRRQLSAVEQDLAESEAKRTLLVTAPESGIATAVLAEAGQTVDSSRPLLSIVPADTPLQAEL YAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVQSISRASVSYAELSSMVGGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLDADILQDT RRLYEWVLEPLYSLTGKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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