Strain | Pseudomonas aeruginosa 213BR 213BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGGCAGCCCCGAAGGCGAGCTGGCGGTGGCCCAGGCCATCGTCTACCTGGCCTGTGCGCCGAAGAGCAATGCGGTGTACAGCGCGTTCAACGCGGCG ATGCGCGACGTCGCCGAAAGCGGCTCGCGGGAAGTGCCATTGCACTTGCGCAACGCGCCGACCAAATTGATGAAGAGCCTCGGCTATGGCGAGGAATACC GCTACGCCCACGACGAGCCGGATGCCTATGCCGCCGGAGAGGATTATTTCCCCGAGGATCTGGAGCCGCGGCGTTACTATCAACCGGTGCCGAGGGGCCT GGAACTGAAGATCCGCGACAAGCTGGAACACCTGGCCGAGCTGGATCGCACCAGTCCCCGCCAACGCAGAAAATCCTGAGCGGTATGGGCTCGGCGGAGC TAGCCAGGCTTCCGCGACGGCGTCGATGACGTCGCCGGGGCCGGCGAAGCGCCAACCGGGCCACGAACCGCCGATAACCGACACGAGACGAGAAAAGAGC
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DNA Sequence for Gene |
>IAK_RS0115100
ATGCTCGATCCCAAACTGGTACGCACCCAGCCGCAAGAAGTGGCTGCCCGCCTGGCCACCCGTGGCTTCCAACTGGATGTCGCACGCATCGAAGCGCTGG AAGAGCAGCGCAAGTCGGTACAGACCCGTACCGAGCAGCTGCAAGCCGAGCGCAACGCGCGTTCCAAGGCGATCGGCCAGGCCAAGCAGCGTGGCGAGGA CATCGCGCCGCTGCTGGCCGATGTCGATCGCATGGGCTCCGAGCTGGAGGAAGGCAAGCGCCAGCTGGACGCCATCCAGGGCGAACTGGATGCCATGCTG CTGGGCATTCCCAACCTGCCGCATGAGTCGGTGCCGGTCGGTGCCGACGAGGACGCCAACGTCGAAGTGCGTCGCTGGGGCACGCCGAAGACCTTCGATT TCGAGGTCAAGGACCATGTCGCCCTCGGTGAACGGCACGGCTGGCTGGATTTCGAGACCGCTGCCAAGCTTTCCGGCGCGCGCTTCGCCCTCATGCGCGG CCCGATCGCCCGCCTGCATCGCGCCCTGGCGCAGTTCATGATCAACCTGCATACCGCCGAGCATGGCTACGAGGAGGCCTACACCCCCTATCTCGTCCAG GCTCCGGCGCTGCAAGGCACCGGCCAGTTGCCGAAGTTCGAGGAGGACCTGTTCAAGATCGGCCGCGACGGCGAAGCTGACCTCTACCTGATCCCGACCG CCGAGGTTTCGCTGACCAACATCGTCTCCGGGCAGATCCTCGACGCCAAGCAATTGCCGCTGAAGTTCGTCGCCCATACCCCGTGCTTCCGCAGCGAGGC CGGTGCCTCCGGGCGCGATACCCGCGGCATGATCCGTCAGCACCAGTTCGACAAGGTGGAGATGGTGCAGATCGTCGATCCGGCCACTTCCTACGAGGCG CTGGAAGGCCTGACCGCCAACGCCGAGCGCGTCCTGCAACTGCTCGAGTTGCCGTATCGGGTGCTGGCGCTGTGCACCGGCGACATGGGCTTCGGTGCGA CCAAGACCTACGACCTGGAAGTCTGGGTTCCCAGCCAGGACAAGTACCGCGAGATTTCCTCCTGCTCCAACTGCGGCGACTTCCAGGCCCGGCGCATGCA GGCCCGCTACCGCAATCCGGAAACCGGCAAGCCCGAGCTGGTGCACACCCTCAACGGCTCCGGCCTGGCCGTCGGCCGCACCCTGGTGGCGGTACTGGAG AACTACCAGCAGGCGGACGGCTCGATCCGTGTGCCGGAAGTCCTCAAGCCCTACATGGCTGGCATCGAGGTGATCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATGGATTTCCTGCCGCTGTTCCACTCCTTGCAAGGGCGCCTCGCGCTGGTGGTCGGTGGCGGCGAAGTCGCCCTGCGCAAGGCGCGCCTGCTGGCCGAC GCCGGCGCGCGCCTGCGCGTGGTCGCGCCGCAGATCCACATCGAACTGCGGCATCTGGTGGAGCAGGGCGGCGGCGAGCTGCTCGAACGCGACTACCAGG ACGGCGACCAGCCCGGCTGCGCCCTGATCATCGCCGCCACCGACGACGAACCGCTGAACGCCGAGGTGTCGCGAGCGGCCAATGCGCGCGGGATACCGGT CAACGTGGTGGACGCGCCGGCCCTGTGCAGCGTGATCTTCCCGGCCATCGTCGACCGTTCGCCGCTGGTGGTGGCGGTCTCAAGCGGCGGCGATGCGCCC GTGCTGGCGCGGCTGATCCGGGCCAAGCTGGAAACCTGGATTCCCTCGACCTACGGGCAACTGGCCGGACTCGCCAGCCGCTTCCGCCACCGGGTCAAGG
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Amino Acid Sequence |
>seryl-tRNA synthetase
MLDPKLVRTQPQEVAARLATRGFQLDVARIEALEEQRKSVQTRTEQLQAERNARSKAIGQAKQRGEDIAPLLADVDRMGSELEEGKRQLDAIQGELDAML LGIPNLPHESVPVGADEDANVEVRRWGTPKTFDFEVKDHVALGERHGWLDFETAAKLSGARFALMRGPIARLHRALAQFMINLHTAEHGYEEAYTPYLVQ APALQGTGQLPKFEEDLFKIGRDGEADLYLIPTAEVSLTNIVSGQILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVDPATSYEA LEGLTANAERVLQLLELPYRVLALCTGDMGFGATKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARYRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMAGIEVIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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